Methylophilus medardicus: FIU01_11255
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Entry
FIU01_11255 CDS
T10472
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
mmec Methylophilus medardicus
Pathway
mmec02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mmec00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FIU01_11255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmec03021
]
FIU01_11255
Transcription machinery [BR:
mmec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FIU01_11255
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_11
PhyR_sigma-like
HTH_23
HTH_29
HTH_3
HTH_IclR
Rv2175c_wHTH
Sigma70_ECF
HTH_17
HTH_24
MerR
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
QDC45040
UniProt:
A0A5B8CVC3
LinkDB
All DBs
Position
complement(2364895..2365401)
Genome browser
AA seq
168 aa
AA seq
DB search
MRVTNTTANEMVSQLYVHHHGWIFNFLRRKLGCTQEAADLTQDTFIKVMCKDDLRDMAQP
RAYITHIAHGVMVNHVRRKEIEKAYLASISDHPEPEYYSPETKAIMLETLFLIDEMLDGL
NAKVKSAFLMSQLEDLSHMEIAQALGVSVSSVRKYIANALLHVLRHRA
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgagagttacgaacacgactgctaacgaaatggtgagccaactttatgttcatcatcat
ggctggatttttaactttttaagaagaaagctaggctgcacacaagaggcggcagattta
acgcaggacacattcataaaggtcatgtgcaaagatgaccttagggacatggcgcaaccc
agggcatacattactcacatcgcccatggtgtgatggtgaatcacgtcaggcgaaaagaa
attgaaaaggcttacttggcttctatcagcgatcatcccgaacctgaatattactcacct
gagaccaaagcaattatgttggagacactatttttaatagatgaaatgctcgatggcctc
aatgcgaaggtaaaaagcgcttttctgatgtcccaactggaggatttaagtcatatggaa
attgcgcaggcgcttggcgtgagtgtgagctctgtgcgcaaatatattgcgaatgctctt
ttgcatgtgttgagacaccgagcctga
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integrated database retrieval system
