Methylophilus medardicus: FIU01_11355
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Entry
FIU01_11355 CDS
T10472
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
mmec Methylophilus medardicus
Pathway
mmec02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mmec00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FIU01_11355
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
mmec02022
]
FIU01_11355
02035 Bacterial motility proteins [BR:
mmec02035
]
FIU01_11355
Two-component system [BR:
mmec02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
FIU01_11355
Bacterial motility proteins [BR:
mmec02035
]
Pilus system
Twitching motility proteins
FIU01_11355
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
HTH_30
HTH_50
AAA_5
HTH_23
HTH_28
AAA_16
AAA_19
VpsR
AAA
Motif
Other DBs
NCBI-ProteinID:
QDC45057
UniProt:
A0A5B8CUT7
LinkDB
All DBs
Position
2382957..2384474
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AA seq
505 aa
AA seq
DB search
MANSYRCLVVDDETDIRELVVLTLERMGIQAESASTVTDAKHMLHSFNYDLCLTDMRLPD
GLGLELVQHINAQFPGLPVAVITAYGSAENAVSALKAGAYDYITKPISLKQLRPLVESAL
KLSSQKESQGANTVDLIGASAAMAYVRTMIAKLARSQAPVYISGESGSGKELAARLIHRN
SSRKDQAFIAVNCGAIPENLMESEFFGYKKGAFTGAIQDTQGLFQAANGGTLFLDEVADL
PLAMQVKLLRAIQEKKVRVVGNASEEAVDVRIISATHKNLNAMMEKGEFRQDLYYRLNVI
QLKMPALRERPEDIPELTERLLGKLCLAQGISVPSIADEAKVYIQQRSFHGNVRELENML
ERALALCDGLTITIDDLSLDDTPAPLSDAPVLPWNARASEPSGLPNADATHRTEHPAQSL
ATPIVANPPVGNNTMLPMDISLSDYLEEIEKRTILQALEKTNNNKTAAAKLLGISFRTLR
YRLTKLGLSKEQDADLEESDGADEE
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattcttatcgttgtctggtggtcgatgatgagaccgatattcgcgaactcgta
gtgctgactttagagcgcatgggcatacaggcagaaagtgctagcacggtcacagatgcc
aagcacatgttgcactcatttaattatgacttgtgtctgacagacatgcgcctacccgat
ggcttagggctcgagctggtacaacatatcaatgcccaattccctggtttgccggtggcg
gtaatcacggcctacggcagcgctgaaaacgctgtttccgcgctgaaagcaggcgcttat
gactacatcaccaaacccatttccctcaaacaattacgtccgctagtcgaatcagcgctc
aaactctcgtcacaaaaagaatcgcaaggggcgaataccgtcgatttaattggggcgtca
gccgccatggcttacgtccgcaccatgattgcgaaactcgcgcgcagtcaggcccccgtc
tacatcagtggcgaatccggcagcggtaaagaattggcggcgaggttgatacaccgcaac
agttcgcgtaaggatcaagcctttattgcggtgaactgtggcgcgattccagaaaacctc
atggaaagtgagttttttggctacaaaaaaggcgcatttactggcgccattcaggacacc
caaggcttgtttcaagccgccaacggtggcacgctattcttagatgaagtggcagattta
cccttggcgatgcaagtcaaattattgcgcgccattcaagagaaaaaagtccgcgtggta
ggtaacgccagtgaagaggccgtcgatgtgcggattatttccgccacccataaaaacctg
aatgccatgatggaaaaaggggagtttcggcaagacttatattaccgcttgaacgtgatc
caactcaaaatgcccgctttgcgcgagcgccccgaagatattcctgagctgactgaaaga
ttattgggcaagctctgtctggcgcagggcatcagcgtgcccagtattgctgacgaagcc
aaagtgtatattcaacaacgctcttttcatggcaatgtgcgcgagctggagaatatgctg
gagcgtgcgctagcgttatgtgatggtctgaccattacgattgatgacctctccttggat
gacactccggcgcctttaagcgatgctccggtgttaccatggaatgcacgtgccagcgaa
ccttctggcctgcctaatgctgacgcaacgcaccgcaccgaacacccggcacagtcactc
gcaacgccgattgtcgccaatccgccagtaggaaacaataccatgctaccgatggatatt
agcctctcggactatctggaagaaatcgaaaaacggaccattttgcaggcgctggaaaaa
accaataacaacaaaacggcggcggctaaattattgggcattagttttagaaccctgcgc
taccgtttaaccaagcttgggctatcaaaagagcaggatgcggatttggaagagtccgat
ggcgcagatgaagaatag
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