Methylophilus medardicus: FIU01_11475 Help Entry FIU01_11475       CDS       T10472                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism mmec  Methylophilus medardicus Pathway mmec02020   Two-component system mmec02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:mmec00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     FIU01_11475  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     FIU01_11475  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:mmec03021]     FIU01_11475 Transcription machinery [BR:mmec03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      FIU01_11475 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR HTH_38 Motif Other DBs NCBI-ProteinID:  QDC45079 UniProt:  A0A5B8CUZ5 LinkDB All DBs Position 2409063..2410598 Genome browser AA seq 511 aa AA seqDB search MKQNLQLRISQNLALTPQLQQSIRLLQLSTLELNQELETILQENPLLEMADGEEGEFEDH SPTATATAESEVEDASSFDVATQKELTPPAESLREELTGNDGEQPNLNEEFTPPEFADDY EEFGSASNWDEAGRNHQDDEDGDFSRQDASNISLREHLISQIQLAHLSKRDMDLVKFLLD SINDDGYLEQDLQEIVDLLPPELEVELLELETALKLIQNLDPIGVGARDLRECILLQLQV LPADTPYLRTAMAIAKDFLPLLANKDFVKLRKALTCDEVVLKGAQQLIRQQNPKPGSEFA TFSHDHFIQHDVVVKKIKGIWMASLNDGVIPKLRINQLYADILKRNRESSGQYLQSQMQE AKWMIKNIQQRFSTILRVSQAIVDRQRNFFEHGEIAMRPLVLREIAEELDLHESTVSRVT THKYMLTPRGVFELKYFFGSSVATDAGGSCSATAIRALIKQMVAEENVKKPLSDNQITDT LAQQGIVVARRTIAKYRESLNIPPANLRKSL NT seq 1536 nt NT seq  +upstreamnt  +downstreamnt atgaagcaaaacctgcaattacgcatctctcaaaatctggcgctcacgccgcaactacaa cagtctatccgtctgttgcaactgtctacccttgagttgaatcaggaactcgaaacgatc ctgcaagaaaatccattacttgaaatggccgacggcgaagagggcgagttcgaagaccac tcgcccaccgccaccgcaacggcagagtctgaagtggaagatgccagctcgtttgatgtg gccacgcaaaaagaactcactccgccggccgaaagcttgcgcgaagaactcactggcaat gatggcgaacagcccaatctgaatgaagagttcaccccgcctgagtttgccgatgattat gaagagtttggcagtgccagcaactgggacgaagccgggcgtaatcatcaagacgatgaa gacggcgacttttcgcgccaagatgctagcaatattagcctgcgtgagcacttgatcagc cagattcaattagcgcacttgtcaaaacgggacatggatctggtcaagtttttgttagat agcatcaatgatgatggctatctagaacaagatttgcaagaaattgtggatctgctgccc cctgagctagaagtcgagctactcgaacttgaaactgcgctcaagttgattcaaaacttg gatccaatcggtgtcggcgcccgcgacttgcgtgaatgcatcttactgcaactacaagtg ctgccagcggatacgccttacctacgcacagcaatggccattgcgaaagactttttaccc ttattggcgaacaaagactttgtcaaactacgcaaagcgctgacttgcgacgaagtggta ctgaaaggcgcacagcaactgatccgccagcaaaaccccaaacctggcagcgagttcgcc acgtttagccacgaccactttatccaacacgacgtggtggtcaaaaaaatcaagggcatc tggatggcctcgcttaacgatggcgtgatcccgaaattacgcatcaatcagctgtatgca gatatcctcaaacgcaatcgagaaagctcaggccaatatctgcaaagccagatgcaagaa gctaaatggatgattaaaaacatccagcaacgcttttcgacgattttgcgcgtctcccag gccattgtagaccgccagcgtaacttttttgaacatggtgaaattgccatgcggccattg gtgttgcgtgaaatcgcagaagagctagatttacatgaaagtaccgtttcaagagtcacc acacataagtacatgctcacaccgcgtggcgtattcgagcttaagtatttctttggtagc tcggtagctaccgacgccggtggctcatgttcggccacagccattcgtgcactgattaag caaatggtggccgaggaaaatgtgaaaaagccgttgtctgacaatcaaatcactgacacg cttgcgcagcagggcatagtggttgcccgccgtactattgccaaatatcgcgagtcgctg aatattccgccggctaatctgcgcaagtccctgtaa

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