Methylophilus medardicus: FIU01_11790
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Entry
FIU01_11790 CDS
T10472
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mmec Methylophilus medardicus
Brite
KEGG Orthology (KO) [BR:
mmec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmec03016
]
FIU01_11790 (truB)
Enzymes [BR:
mmec01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FIU01_11790 (truB)
Transfer RNA biogenesis [BR:
mmec03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FIU01_11790 (truB)
Prokaryotic type
FIU01_11790 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Pus10_C
Phage_head_fibr
Motif
Other DBs
NCBI-ProteinID:
QDC45133
UniProt:
A0A5B8CV38
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All DBs
Position
complement(2479253..2480152)
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AA seq
299 aa
AA seq
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MQFKRIKRAVHGVLLLDKPYGFSSNQALQKVKWLYQAEKAGHTGTLDPLATGVLPICFGE
ATKFAQYLTDENKTYIADIRFGISTTTGDIEGEVIQQVDCHVSLADIEQVLPQFMGEISQ
VPPMYSALKVNGKPLYAYARDGVELMRAARQVTIHALRVLECADNHAKIEVCCSKGTYIR
TLAEDIGNALQAGAHLTALRRTATATYQIAKAISIDALASMTDAQRDALLLPVDTAIAAL
PKILLPEDAAYYFKQGNPVWMSGAIPHSELRIYSEAGLFLGVGLQQRDGRIAPKRVVNL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcaattcaaacgcattaaacgcgccgtccatggtgtgttgttgctcgacaagccctac
ggtttttcatccaatcaggccttacaaaaggtcaaatggttgtatcaagcagaaaaagcc
ggtcacaccggcacgctcgacccactagcgactggcgtattgccgatttgttttggcgaa
gcgaccaaatttgcgcaatatttgaccgatgaaaacaaaacctatattgctgatatccgg
tttggtataagcaccactactggcgatattgagggtgaggtgatccaacaggtcgattgc
catgtctcactggccgatattgaacaggtgctgccgcaatttatgggcgaaatcagccaa
gtgccaccgatgtattccgccttaaaagtgaacggcaaacctttgtatgcctacgcgcgc
gatggcgtggagttaatgcgggcggccagacaagtaaccattcatgccttgcgcgtgctt
gaatgtgccgacaatcatgccaagattgaggtatgttgtagcaaggggacgtatatccga
acgttggctgaagatattggcaatgccttgcaagccggtgcgcatttaactgcactacgc
cgcacggcgacggcgacttatcaaattgcaaaggcgatcagcattgacgcattggcttcg
atgacagacgcgcagcgggatgcactgctattgcctgtcgataccgcgattgcggccttg
ccgaaaattctattaccagaagacgctgcttattattttaagcagggcaatccggtgtgg
atgtcgggggcgattccccatagtgagttgcgtatttatagcgaggccggattgttttta
ggggttggcttacagcaacgcgatggccgtatcgcgccgaaacgcgtcgtaaatctttaa
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