Methylophilus medardicus: FIU01_11865
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Entry
FIU01_11865 CDS
T10472
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
mmec Methylophilus medardicus
Pathway
mmec03420
Nucleotide excision repair
Brite
DNA repair and recombination proteins [BR:
mmec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FIU01_11865 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FIU01_11865 (uvrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QDC45143
UniProt:
A0A5B8CV51
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Position
2495535..2498369
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AA seq
944 aa
AA seq
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MEFIKIRGARTHNLKNINLDIPRNQLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLARMDKPDVDLIEGLSPAISIEQKSTSHNPRSTVGTVTEIHDYLRLLFARAGDPEC
PEHGIKLEAQTVSQMVDSTLKLPEDTKLMILAPVVANRKGEQLDLFDTLKAQGFVRLRID
GKIYEMDALPQLAKTTKHSVDVVVDRLKVREDMKQRIAESFETALRLADGKAIALEMDSE
KEHLFSAKFSCPVCDYSLAELEPRLFSFNNPMGACPKCDGLGQVTFFDPKRVVAFPHLSL
ASGAIKGWDKRNQFYFQMLASLSQHYNFDLEAPFENLAEDIQQTLLFGSGRDQITFKYLN
ERGTFFSKSHTFEGIINNLQRRYRESDSTAVRDELAKYINATSCPDCAGTRLRKEARHVK
VGDRNIHQICEVPLKQALHFFESLQLSGQKLAIADKIVKEIENRLKFLTNVGLDYLSLSR
SAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLLETLKRLRDLGNSVI
VVEHDQDAIQLADFIVDIGPGAGEHGGNIVSFGTPAEIEADPNSLTGQYISGKKQITFKL
PRTKPDPARWLKLNHATGNNLKDVSIEIPVGLLTCVTGVSGSGKSTLINDTLYRVVATHL
YGSTTEAAPHASIDGLEFFDKVVDVDQSPIGRTPRSNPATYTGLFTPIRDLFASVPESRA
RGYGPGRYSFNVKGGRCEACQGDGVLRVEMHFLPDVYVPCDVCKGQRYNRETLEIQFKGK
NIHQVLAMTVEQAHQFFNAQPVIERKLKTLLDVGLGYITLGQSATTLSGGEAQRVKLSLE
LSKRDTGRTLYILDEPTTGLHFADIQLLLDVIHRLRDSGNTVVIIEHNLDVIKTADWLID
MGPEGGDGGGIVVGVGAPEELAKNTASYTGRYLIPLLEHLAVRA
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggaatttatcaaaattcgcggggcgcgcacccataatctgaagaatatcaatctggat
atcccacgtaaccaattggtggtgatcacgggtctttccggctcaggaaaatcttcgcta
gcctttgatacgctctatgcagaggggcaacgccgctatgtcgaaagtttgtccgcttat
gcccgccagtttctggcgcgcatggataaacctgatgtcgacctcatcgagggcttatcg
cccgcgatttctattgagcaaaaatctacctcacacaatccacgttctaccgtgggcaca
gtcactgagattcatgattatctgcgcttgctgttcgctcgcgctggcgacccagaatgc
ccggagcatggcatcaaattagaggcgcaaaccgtcagtcagatggtggatagcaccctc
aaactgcctgaagacaccaagctcatgatcctggcaccagtggtagccaaccgcaaaggc
gaacaactagatttatttgatacgcttaaagcgcaaggttttgtgcgtttgcgcattgat
ggcaaaatctatgaaatggatgccttgccgcaactggccaaaaccaccaaacatagcgtg
gatgtggtggttgaccgtttaaaagtgcgcgaagacatgaaacagcgcatcgccgaatcc
tttgaaacagcgctcaggctagccgatggcaaagctattgcgctcgaaatggacagcgaa
aaagaacacctgttttcagccaagttttcttgccctgtgtgcgattactcactcgctgaa
ctggaaccacgcctgttcagctttaacaacccgatgggcgcttgccctaaatgtgatggc
ctaggtcaggtgacgttttttgacccaaaacgggtggtcgcatttccgcatttgtctctc
gcaagcggcgccattaaaggctgggataagcgtaaccagttttactttcaaatgctagcc
agcttgagtcagcattacaattttgacttagaagccccgtttgaaaacttagccgaggac
attcagcaaaccttgctgtttggatctggtcgcgaccaaatcacctttaaatatctcaat
gagcgcggcacctttttcagcaagtcgcacacctttgaaggcatcattaataatctgcaa
cggcgctatcgcgaaagtgattccaccgcagtgcgtgacgagttggcgaaatacatcaac
gctactagctgtccggattgcgcaggcactcgccttcgcaaagaggcgcgtcacgtcaaa
gtgggcgaccgtaacattcaccaaatttgtgaagtgccgctcaagcaggcattacacttt
tttgaatcactgcaactgagcggccaaaagctagcaattgcggataagatcgtcaaagag
attgaaaatcgtctcaaatttttgaccaatgttggcttagactatttatcgctttcacgc
tctgccgaaactctgtccggcggtgaggcccagcgtatccgacttgcctcgcaaatcggt
agcggcttaaccggcgtgatgtacgtgcttgacgagccttctatcggcttgcaccaacgg
gacaacgatcgtctgcttgaaacactcaagcgcctgcgcgacttaggcaatagcgtgatt
gtagtggaacatgaccaagatgccattcaactggctgactttattgtggatattggcccc
ggggcgggtgagcatggcggcaatattgtctcgttcgggacaccggctgaaatcgaagca
gaccccaactcactcaccgggcaatatattagtggcaaaaagcaaatcaccttcaaactg
ccccgcaccaaaccagacccagcacgttggctaaagctcaatcatgccaccggcaataac
cttaaggatgtgagtattgaaattccagtcggcttgctgacgtgtgtgactggggtctcg
ggcagtggaaaatccaccctgatcaacgatacgctttaccgcgtggtggcgacacattta
tatggcagcaccaccgaagctgcgccgcacgcaagcatcgacggcttagagttttttgac
aaagtggttgacgttgaccaaagcccgattggccgcacgccgcgctccaacccagcgacc
tataccggcttatttacgccaattcgtgatttattcgccagcgtgcccgaaagccgcgcc
cgcggctatggcccgggacgctactcgttcaacgtcaaaggtggtcggtgcgaagcctgc
caaggcgacggcgtgttgcgggtagaaatgcattttctgccggatgtgtatgtgccttgc
gatgtgtgtaaaggtcagcgctataaccgcgaaacacttgaaattcaattcaagggaaaa
aacattcaccaagtgctcgccatgacggtggagcaagcgcaccagttttttaatgcgcaa
ccggtgatcgaacgcaaactcaaaacattgctcgatgttggtctcggttatatcacgctt
gggcaatcggccactacgctttcaggcggcgaggcgcaacgcgtgaaactatcgcttgag
ctgagcaaacgagacaccggccgcacactgtatattctcgacgagccgaccaccggcttg
catttcgccgacattcaattactacttgatgtgattcatcggttgcgggattcaggcaat
acggtagtgatcatcgaacacaatttggacgtgatcaaaacggctgactggctgattgat
atgggtccggaaggtggcgatggtgggggtatcgtagtgggggtaggcgcgcctgaagaa
ctggcaaaaaatacggccagctatactggccgttacctcatacccttactagaacatctc
gctgtcagggcttaa
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