Martelella mediterranea: Mame_00256
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Entry
Mame_00256 CDS
T04757
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mmed
Martelella mediterranea
Pathway
mmed03030
DNA replication
mmed03410
Base excision repair
mmed03420
Nucleotide excision repair
mmed03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mame_00256 (polA)
03410 Base excision repair
Mame_00256 (polA)
03420 Nucleotide excision repair
Mame_00256 (polA)
03440 Homologous recombination
Mame_00256 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmed03032
]
Mame_00256 (polA)
03400 DNA repair and recombination proteins [BR:
mmed03400
]
Mame_00256 (polA)
Enzymes [BR:
mmed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Mame_00256 (polA)
DNA replication proteins [BR:
mmed03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Mame_00256 (polA)
DNA repair and recombination proteins [BR:
mmed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Mame_00256 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mame_00256 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
HHH
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
AQZ49639
UniProt:
A0A1U9YW24
LinkDB
All DBs
Position
complement(268115..271102)
Genome browser
AA seq
995 aa
AA seq
DB search
MDLCRPSGYGFAMKKDDHLFLIDGSGFIFRAFHALPPLTRKSDGLPVGAVSGFCNMLWKL
LTQARDTSVGVTPTHLAVIFDYSSKTFRKEIYPDYKAHRPPPPEDLVPQFALIREATRAF
NLPCIEMEGYEADDIIATYARMAVEAGGDATIISSDKDLMQLVGPKVHMYDGMKDRQIGV
PEVIEKWGVPPEKMIDLQALTGDSVDNVPGVPGIGPKTAATLLEEFGDLDNLLANAESIK
QNKRRENIIASRDLVLVSRQLVTLKQDCPVDVPLDALSLEPQDGPKLVSFLKAMEFNSLT
RRVAEATGAEAQAIEAAPVDVEWGADAHGPDLDPGEGKAPAAVTAPGATDGKRPADLAAA
RAARFASLPINRDNYETIRDLTALEGWIETARERGLVAFDTETTSLDAMQAELVGFSLAL
YDEDAADDGAVIRAAYVPLTHKAGQDDLLGGGLAEGQIPFDAALAALKGLLEDEAVMKIA
QNLKYDYLVMLRHGITVKNFDDTMLLSYVLDSGMGGHGMDALSEKWLGHQPIPYKEVAGS
GRNMVTFDYVDIDRATAYAAEDADVTLRLWLVLKPRLAAERVMTVYERLERPLLPVLARM
EERGISVDRQILSRLSGELAQKAAALEDEIYELAGEKFNIGSPKQLGDILFGKMGLPGGK
KTKSGQWSTAVQVLDDLAAEGLPLPSRIVDWRQMTKLKSTYTDALPGYIHPQTKRVHTSY
SLASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFIANPGHKLLSADYSQIELRVLAHVAD
IPQLRQAFADGIDIHAMTASEMFGVPVEGMPGDVRRRAKAINFGIIYGISAFGLSNQLGI
ERSEASDYIKRYFERFPGIRDYMEATKERARDVGYVETIFGRKIHYPEIKSSNHQVRSFN
ERAAINAPIQGSAADIIRRAMTRIEPALGEAGFAERAKMLLQVHDELIFEVEDDAVDKTR
AVIVDIMENAAMPAVSMAVPLKVDARAAHNWDEAH
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggacctttgccgcccgagcggctatggattcgccatgaaaaaagacgatcaccttttc
ctgattgacggctcgggcttcatcttccgcgccttccatgcgctgccgccgctgacgcgc
aaatccgatggcctgccggtgggcgcggtttccggcttctgcaacatgctgtggaagctt
ctgacacaggcgcgcgacacctccgtgggcgtcacgccgacgcatctggccgtgatcttc
gactattcctcgaagaccttccgcaaggagatttacccggattacaaggcccatcgcccg
ccgccgccggaggacctggtgccgcaattcgcgctgattcgcgaggcgacccgcgccttc
aaccttccctgcatcgagatggaaggctatgaggccgacgacatcatcgccacctatgcc
cggatggcggtggaagcgggcggtgacgccaccatcatctcttccgacaaggatctgatg
cagctcgtcggccccaaggtccacatgtatgacggcatgaaggaccgccagatcggcgtg
ccggaagtgatcgagaaatggggcgtgccgccggaaaagatgatcgacctgcaggcgctg
accggcgattcggtggataacgtgcccggcgtgccgggcatcgggccgaagacggcggcg
acgctgctggaggaattcggcgatctcgacaatctgctggccaatgcagaatcgatcaag
cagaacaagcgccgcgaaaacatcatcgccagccgcgacctggtgctggtctcgcgccaa
ctggtgacgctgaagcaggattgcccggtcgacgtgccgctcgatgcgctgtcgctggag
ccgcaggacgggccgaagctggtctcgtttttgaaggcgatggagttcaattcgctgacc
cgtcgcgtggccgaggcgaccggcgccgaggcgcaggcgatcgaggccgcgcccgtcgac
gtcgaatggggcgctgacgcccacgggcccgaccttgatccgggtgagggcaaggcgccg
gccgcagtgaccgcgcccggtgcgaccgacggcaagcgcccggcggacctcgccgcggca
agggcggcgcggtttgcatcgctgccgatcaaccgcgacaactacgagacgatccgcgat
ctgactgcgctcgaaggctggatcgagaccgcgcgcgaacgcggccttgtcgccttcgac
accgagaccacctcgctcgacgcgatgcaggccgaactcgtcggcttctcgctggcgctc
tacgacgaggacgccgccgatgacggcgcggtgatccgcgcggcctatgtgccgctcacc
cacaaggccggtcaggacgatctgctcggcggcgggcttgccgaggggcagattccgttc
gatgcggcactcgccgcgctgaagggcctgctcgaggacgaggcggtcatgaagatcgcc
cagaacctcaaatatgactacctggtaatgctgcgccacggcatcacggtgaagaatttc
gacgacaccatgctgctctcttacgtgctcgattccggcatgggcgggcatggcatggac
gcgctttcggaaaaatggctcggccaccagccgatcccctacaaggaggttgccggctcc
ggccgcaacatggtcaccttcgattatgtcgatatcgaccgcgccacggcttacgcggcg
gaagacgccgatgtgacgctcaggctctggctggtgctgaagccccggcttgccgccgaa
cgggtgatgaccgtctacgagcggctcgaacggccgcttctgccggtgctggcgcgcatg
gaagaacgcggcatttccgtcgaccggcagatcctgtcgcggctttccggcgagctggcg
cagaaggccgccgcgctcgaggatgaaatctacgaactggcgggcgaaaaattcaacatc
ggctcgcccaagcagctcggcgacatcctgttcggcaagatggggcttcccggcggcaag
aagaccaagagcgggcagtggtccaccgccgtgcaggtgctggacgatctcgccgcagag
gggctgccgctgccaagccggatcgtcgactggcggcagatgaccaagctgaaatcgacc
tataccgatgcgctgccgggctatatccacccccagaccaagcgcgtccacacctcctat
tcgctggcctcgaccacgaccgggcggctgtcctcgtcggagccgaacctgcagaacatt
ccggtgcgcaccgccgagggccgcaagatccgcaccgccttcatcgccaatccgggccac
aagctgctgtcggccgactacagccagatcgagcttcgcgtgctcgcccatgtcgccgat
attccccagctccgccaggccttcgccgatggcatcgacattcatgcgatgacggcatcg
gaaatgttcggcgtgccggtggaaggcatgccgggcgatgtgcgccggcgcgccaaggcg
atcaatttcggcatcatctacggcatctccgccttcgggctctccaaccagctcggcatc
gagcgctcggaggcgagcgactatatcaagcgctatttcgagcgcttccccggcattcgc
gattatatggaagccaccaaggaacgggcgcgcgatgtcggctatgtcgagacgatcttc
ggccgcaagattcattatccggaaatcaaatcctccaaccatcaggtcagaagtttcaac
gagcgcgcggccatcaacgcgccgatccagggctcggccgccgatatcatccgccgcgcc
atgacccggatcgagccggcgctcggcgaagccgggtttgccgagcgggcgaagatgctg
cttcaggtccatgacgaactgattttcgaggtcgaggacgacgcagtcgacaagacccgc
gccgtgatcgtcgacatcatggaaaacgccgccatgcccgccgtttcgatggcggttccg
ctcaaggtcgatgcccgcgccgcccacaactgggacgaggcgcactga
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