Martelella mediterranea: Mame_01499
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Entry
Mame_01499 CDS
T04757
Symbol
rnd_1
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mmed
Martelella mediterranea
Brite
KEGG Orthology (KO) [BR:
mmed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmed03016
]
Mame_01499 (rnd_1)
Enzymes [BR:
mmed01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Mame_01499 (rnd_1)
Transfer RNA biogenesis [BR:
mmed03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Mame_01499 (rnd_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AQZ50858
UniProt:
A0A1U9YZL5
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All DBs
Position
1618230..1618847
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AA seq
205 aa
AA seq
DB search
MIRVHKQDIPAEQAARYTGAIAIDSETLGLIPRRDRLCVVQISPGDGSADLIQIAPGQTE
APNLTAMLADPDRQKIFHFGRFDIAVLYHTFGVTTANVFCTKIASRLTRTYTDRHGLKDN
LKEMLDIDVSKAQQSSDWAAEELSEAQLQYAASDVLYLHRLRDKLMERLIRDGRMELASA
CFEFLPTRAKLDLLGWEETDIFAHS
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcgtgcacaaacaagatattccggcagaacaggcggcgcgttataccggcgcg
atcgcgatcgacagcgagacgttgggcctcattccgcgccgcgaccggctgtgcgtcgtg
cagatttcgccgggcgatggcagcgccgacctgatccagatcgcgccggggcagacggag
gcgcccaacctcaccgccatgctcgccgaccccgatcgccagaaaatcttccatttcggc
cgcttcgatatcgccgtactctatcacaccttcggcgtcaccaccgccaatgtgttctgc
accaagatcgcctcgcgcctgacccggacctataccgaccggcacgggctcaaggacaat
ctcaaggaaatgctcgacatcgacgtttccaaggcgcagcaatcctccgactgggcggcc
gaggaactgagcgaggcacagctgcaatacgccgcctccgatgttctttacctgcatcgc
ctgcgcgacaagctgatggaacggctgatccgcgacggccgcatggagcttgccagcgcc
tgtttcgagttcctgcccacaagggcgaagctcgaccttctcggctgggaagaaaccgac
attttcgctcatagctga
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