Martelella mediterranea: Mame_01976
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Entry
Mame_01976 CDS
T04757
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mmed
Martelella mediterranea
Brite
KEGG Orthology (KO) [BR:
mmed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmed03016
]
Mame_01976 (truB)
Enzymes [BR:
mmed01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Mame_01976 (truB)
Transfer RNA biogenesis [BR:
mmed03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Mame_01976 (truB)
Prokaryotic type
Mame_01976 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AQZ51317
UniProt:
A0A1U9Z0T6
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All DBs
Position
2131698..2132657
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AA seq
319 aa
AA seq
DB search
MTTTVKNKKMARQRKPKGRPISGWLILDKPIDYGSTEAVSKIKWLFKAQKAGHAGTLDPL
ASGMLPIALGDATKTVPYVMDGRKIYEFTVTWGEERTTDDLEGEVSESSDNRPQRADIEA
LLEKYTGVIEQVPPQFSAIKIDGNRAYDLAREGETVDIPTREVEIHRLTLLGCPDENTAE
FEVECGKGTYVRALARDMGRDLGCFGHISSLRRPFVAPFSEDMLVPLSELTALEEIEDDE
ERFAALEEYLVDTSEALASLPHVPVNEDQARRLKLGNPIILRGAHAPVEEPDAYASLAGK
LVAIGEIAEGQFKPRRVFG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgacggtaaagaataagaaaatggcgcgacagagaaaacccaagggccgtccg
atctccggctggctgatcctcgacaagccgatcgattacggctccaccgaggccgtttcc
aagatcaagtggctgttcaaggcgcagaaggcgggacacgccggcacgcttgatccgctc
gcctccggcatgttgccgatcgcgctcggcgacgccaccaagaccgtgccttacgtgatg
gacggccgcaagatctatgaattcaccgtcacctggggcgaggaacgcaccacggacgat
ctcgagggcgaggtcagcgagagctccgacaaccgcccgcagcgggctgatatcgaggcg
ctgctggaaaaatataccggcgtcatcgaacaggtgccgccgcagttttccgccatcaag
atcgatggcaaccgcgcctatgatctggcgcgcgagggcgagaccgtcgatatcccgacc
cgcgaggtggagatccaccgcctgacgctgctcggctgcccggacgaaaacaccgcggaa
ttcgaggtggaatgcggcaagggcacctatgtgcgcgcgcttgcccgcgacatgggccgc
gatctcggctgcttcggccatatctcgtcgctgcgccgtcctttcgtggcgccgttttcc
gaggatatgctggtgccgctctcggaactgaccgcgctcgaggagatcgaggacgacgag
gagcgcttcgccgcgttggaagaatatctcgttgacacctcggaagcgcttgccagcctt
ccccatgttccggtgaacgaggatcaggcccgccggctgaagctcggcaacccgatcatc
ctgcgcggtgcccatgcgccggtggaggaaccagatgcctacgcctcgctcgccggcaag
ctggtcgcgatcggcgagatcgccgagggccagttcaagcccaggcgcgtattcgggtga
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