Martelella mediterranea: Mame_02686
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Entry
Mame_02686 CDS
T04757
Symbol
dnaE1
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mmed
Martelella mediterranea
Pathway
mmed03030
DNA replication
mmed03430
Mismatch repair
mmed03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mame_02686 (dnaE1)
03430 Mismatch repair
Mame_02686 (dnaE1)
03440 Homologous recombination
Mame_02686 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmed03032
]
Mame_02686 (dnaE1)
03400 DNA repair and recombination proteins [BR:
mmed03400
]
Mame_02686 (dnaE1)
Enzymes [BR:
mmed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Mame_02686 (dnaE1)
DNA replication proteins [BR:
mmed03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Mame_02686 (dnaE1)
DNA repair and recombination proteins [BR:
mmed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Mame_02686 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HROB
Motif
Other DBs
NCBI-ProteinID:
AQZ52012
UniProt:
A0A1U9Z331
LinkDB
All DBs
Position
2885805..2889272
Genome browser
AA seq
1155 aa
AA seq
DB search
MQAEGKEQAVRFVHLRVHSAYSLLEGALPLKTVMKLAVADRQPAIAVTDTNNLFCALEFS
QKAVGEGLQPIIGCQLSIDMEDGGDGERRSGGHLPPKKSSIVLLAADPTGYANLMHLVSE
AYLGGEGHDSIYITKSWLSAHSDGLIALTGGRTGPIDEAVISGFEAKAAERLAFLKSAFG
DRLYVEVQRHGNFDVQHERRVIALAYELDLPLVATNEAFFPSRDDFEAHDALMAVAHNAI
VSDDRRFRLTPDHYLKSQEEMAALFADLPEAIENTVEIARRCSFVLDTRMPILPRFTGAS
DDPEEAERAEAAELRRQAREGLEARLAHVGLSPGHTREEYFERLDYELGVIEGMKFPGYF
LIVADFIKWSKERDIPVGPGRGSGAGSLVAYALTITDVDPLRFSLLFERFLNPERVSMPD
FDIDFCQDRREEVIRYVQEKYGRAQVAQIITFGSLQARAALRDVGRVLEMPYGQVDRISK
LVPNNPANPVTLAQAIEDEPKFQEAAEEEPIVGRLLAIAQKIEGLYRHASTHAAGIVIGD
RSLSQLVPMYRDPRSDMPVTQFNMKWVEQAGLVKFDFLGLKTLTVLKTAVDFIARKGIVV
DLSLVPLDDPESYEMLARGETVGVFQVESAGMRKALIGMRPDRIEDLIALVALYRPGPME
NIPVYNARKHNEEEIESIHPLIDPLLAETQGVIIYQEQVMQVAQVLAGYSLGEADLLRRA
MGKKIKEQMDKQRVRFVEGAVEKGVKKQRANEIFDLLAKFANYGFNKSHAAAYAIVSYHT
AFLKAHYPVEFLAASMTLDMANTEKLNDFRHDAQRLGIEVVAPSVQTSFRHFEPGEGRIF
YALAAIKGVGEAAVDHIVAVRGDRAFDSLEDFARRIDPKLVNRRVLESLICAGAFDCFGK
DRAALLAGLDRIIGLAQRSQDDKTSGQADIFGSAGDLPQITLPDYTPMPDSERLMREFQM
LGFYQTAHPLDAYADILSRMRVQSFADFSLSVKNGSGRGRLAGTVVAKQERKTRTGNRMG
IITLSDATGQFEAVLFSEMLYQYRDLLEPGTSVVITVAADVRPEGIGMRIQTVQSLEEEA
VRQQSAMRVYLRDDSPLASLSRHLNSSGDGIVSFVVIQNEGLREVEVELPGKYRLSPEVA
SAMRAVSGVVDVELV
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctgaaggcaaagagcaggcggttcgtttcgtgcatttgcgcgttcactcggcc
tattcgctgctcgagggcgcgctgccgctgaaaacggtgatgaagctcgccgtagccgac
aggcagcccgcaattgcggtgaccgataccaataatctcttctgcgcgctggagttttcc
cagaaggccgtgggcgaggggctccagccgatcatcggctgccagttgtcgatcgatatg
gaggatggtggcgacggcgagcgccgcagcggcggacatctgccgccgaagaaatcgtca
atcgtgctactcgccgccgatccgactggctatgccaatctcatgcatcttgtcagtgag
gcctatctcggcggagaggggcatgacagtatatatataacgaagtcatggctcagcgcg
cattcggacggactgatcgcgctcaccggcgggcggaccggcccgatcgacgaagccgtt
atttccggcttcgaggcgaaggccgctgaaaggctcgcattcctgaaatccgcttttggc
gaccggctctacgtggaagtgcagcggcacggcaacttcgacgtccagcacgagcgtcgg
gttatcgctctcgcttatgaactcgatcttccgctggttgcgaccaatgaggcgtttttc
ccgagccgcgatgatttcgaggcgcatgatgcgctgatggcggtggcgcacaatgccatc
gtatccgacgatcgccgtttcagactgacaccggatcactatctgaagtcacaggaagaa
atggcggctctgtttgccgatctgcccgaagcgatcgagaacacggtggagatcgcgcgc
cgatgcagcttcgtgctggatacccgcatgcccattctgccgcgcttcaccggcgcctca
gatgatcccgaagaagcggagcgggcggaggccgcagaattgcgccggcaggcgcgtgag
ggtctggaggcgcggctcgcccatgtgggcctgagcccgggccacacgcgcgaagagtat
ttcgagcggcttgactatgagctcggcgtgatcgagggcatgaagtttccgggctacttc
ctgatcgttgccgacttcatcaaatggtcgaaggaacgcgatattccggtggggcccggc
cgcggctccggcgcgggttcgctggtcgcctatgccctgacgatcacggatgtcgatcca
ctgcgtttctcactgctgttcgaacgcttcctcaatcccgaacgcgtgtcgatgccggac
ttcgatatcgacttctgtcaggaccggcgcgaggaagtcatccgctacgtgcaagagaaa
tacggccgcgcgcaggttgcccagatcattactttcggatcgctgcaggcccgcgcggcg
ctgcgcgacgtcgggcgcgtgctcgaaatgccctatggtcaggtcgaccgcatttccaaa
ctcgttcccaacaatcccgccaaccccgtgacgctcgcccaggcgatcgaggacgaaccc
aaatttcaggaggccgccgaggaggagccgattgttggtcggctgctcgcgattgcacag
aagatcgaggggctctaccgccatgcttcgacccatgcggcgggcatcgttatcggtgac
cgatcgttgtcgcagctggtgccgatgtatcgcgatccgcgctcagacatgccggtcacc
cagttcaatatgaaatgggtggagcaggctggcctcgtgaagttcgacttcctggggctg
aagacgttaacggtgctgaagaccgccgtcgatttcatcgcccgcaaggggatagtggtc
gatctctcgctcgtcccgctggatgatcccgaatcctacgaaatgttggcgcgcggcgag
acggtcggcgtgttccaggtggaaagcgccggcatgcgcaaggcgctgatcggcatgcgg
cccgaccgcatcgaggatctgattgcgctggtggcgctctaccgtcccggacctatggaa
aacatcccggtctataatgcgcgcaagcataatgaggaggagatcgaatcgatccacccg
ctgatcgacccgctgctagccgaaacccagggcgtgatcatctaccaggaacaggtgatg
caggtggcgcaggtgctggcgggctattcgctcggcgaagcggaccttctgcgccgcgcc
atgggtaagaagatcaaggagcagatggacaagcagcgggtccggtttgtcgagggcgcg
gttgagaagggtgtcaagaagcagcgggccaacgagattttcgatctgctcgcgaaattc
gccaattacggcttcaacaagtcccacgccgctgcctatgcgatcgtgtcctatcatacc
gccttcttaaaggcgcattatccggtcgagttcctcgctgcctcgatgacgctggacatg
gccaataccgaaaagctgaacgatttccgtcatgatgcgcagcgtctcggcatcgaggtc
gtcgccccttcggtgcagaccagcttccggcattttgagccgggcgaaggacggattttc
tatgcactcgcggccatcaagggcgtcggcgaggcggcggtcgatcacatcgtcgcggtc
agaggggaccgggcgttcgatagcctggaggatttcgcgcggcggatcgatccgaaactc
gtcaaccggagggtgctcgaaagcttgatctgcgccggcgccttcgattgctttggcaaa
gatcgcgcggcgcttctggccggtctcgatcgcatcatcggtctggcgcaacgcagccag
gacgacaagacgagcggacaggcagatattttcggcagcgctggcgacttgcctcagatc
acgctaccggattataccccgatgccggattcggagcggctgatgcgcgaattccagatg
ctgggcttttatcagactgcccatccgcttgacgcctatgccgatatattgtcccgcatg
cgcgtccagagctttgccgacttctcgctttcggtgaagaatggttccggtcgcgggcgc
ctggccggcactgtggtggccaagcaggagcgcaagacgcgcaccggcaaccgtatgggc
atcatcacgctttcggatgcgaccggccagttcgaggcagtgctgttctccgagatgctt
tatcagtaccgcgacctcttggaaccgggaacctccgttgtcatcaccgtggcggccgat
gtccgtcccgaagggatcggcatgcggatacagacggtccagtcgctcgaggaagaggcg
gtgcgccagcaaagcgcgatgcgcgtctacctgcgcgatgattcgccattggcctcgctg
tcccggcacctgaacagcagcggagacgggatcgtgtccttcgtggtcatccagaacgag
gggctgcgcgaagtggaggtcgagcttccgggtaaatacaggctctccccggaagtggcg
tcagccatgcgcgcggtatcgggcgtggtcgacgtcgaactcgtttag
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