Martelella mediterranea: Mame_03089
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Entry
Mame_03089 CDS
T04757
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mmed
Martelella mediterranea
Pathway
mmed03410
Base excision repair
mmed03430
Mismatch repair
mmed03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mame_03089 (recJ)
03430 Mismatch repair
Mame_03089 (recJ)
03440 Homologous recombination
Mame_03089 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmed03400
]
Mame_03089 (recJ)
DNA repair and recombination proteins [BR:
mmed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Mame_03089 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Mame_03089 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Mame_03089 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
ATPgrasp_N
Motif
Other DBs
NCBI-ProteinID:
AQZ52405
UniProt:
A0A1U9Z3X4
LinkDB
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Position
complement(3317403..3319217)
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AA seq
604 aa
AA seq
DB search
MTDTAAQRKANPRAFLGVERSARDLRWVPRLGPAGENRALAMAQNHGLSELIARVLAGRD
VPVDEAPAFLDPTLRSLMPDPFSLTDCEAAVARLIEAVKRGEKVAIFGDYDVDGACSSAL
MYRFLTMLGLEVEIYIPDRIFEGYGPNPQAIESLIRDGAKLIVTVDCGSTSHESLAAAKA
LGVDVVVIDHHQVGVDLPECAALVNPNREDDLSGQGHLCAAGVVFLVLVAAHRALRQAGD
MRAGRIDLLSWLDLVALATVCDVVPLRGLNRAYVVKGLIVARSLSNPGLAALFKRAGLAG
PVTPYHLGFLIGPRINAGGRIGDAALGSRLLTVDDTEEAEALAERLDQLNRERQAIETAM
LQEAETDAIAEFGDGSGAGVIVTARQGWHPGIVGLLASRLKDRFGRPAFAIAVDANGRGT
GSGRSISGFDLGRMVRMAVEQGLLVKGGGHAMAAGLTVTREKLSALRAFFEDHARDAVEA
LAADAVLKIDGALSASGATLDLIDRLEAAGPYGSGHPQPIFALPQHRVRDARVIGAGGHV
KVRLESAEGTALDGIAFRAADKPLGELLLGSRGRSLHVAGTLSGDHWQGQRRVQLRIIDA
ANPS
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgactgatactgccgcccagcgcaaggcgaacccccgggcatttctgggcgtggagcgt
tccgcgcgcgatctgcgctgggtgccgcgtctgggcccggcaggtgaaaatcgggcgctg
gccatggcgcagaaccacggcctgtccgagctgattgcccgggttttggccggccgcgat
gtgccggtggacgaggcgcccgcctttctggatccgaccctgcgctcgctgatgccggac
cctttcagcctgaccgattgcgaggcagcggtcgcgcgcctgatcgaagccgtcaaacgc
ggcgaaaaggtcgcgatcttcggcgactacgacgtcgacggggcctgttcgtcggcgctg
atgtaccgcttcctcaccatgcttggcctcgaggtcgagatctatatccccgaccgcatc
ttcgagggctacgggcccaacccgcaggcgatcgaaagcctgatcagggacggcgcgaaa
ctgatcgtgaccgtggattgcggctccaccagccacgaatcgcttgcggcggcgaaggcg
ctcggcgtcgatgtcgtggtgatcgaccatcatcaggtcggcgtcgacctgccggaatgc
gcggccctggtgaaccccaaccgcgaggacgatctttcggggcagggacatctctgcgcc
gccggcgtggtattcctcgttctggtcgccgcgcaccgcgcgctgcgccaggccggcgac
atgcgggccgggcggatcgatctcctgtcctggctcgatctggtggcgctggcgacggtg
tgcgacgtggtgccgctcagggggctcaaccgcgcctatgtggtcaaggggctgatcgtg
gcgcgctcgctttccaatcccggtctcgcggcgctgttcaagcgcgccggccttgcgggg
ccggtgacgccctatcacctcggctttcttatcggcccgcgcatcaatgccggcgggcgg
atcggcgatgcggcgctcggcagcaggcttctgacggtcgatgatacggaagaggcagag
gcgctcgccgaacgcctcgaccagctcaaccgcgagcgccaggcaatcgagacggcgatg
ctgcaggaggcggagacagacgcgattgccgaatttggcgatggcagcggcgcgggcgtg
atcgtgaccgcccgccagggctggcatcccggcattgtcggcctgctggcctcgcgcctg
aaggacaggttcgggcggcccgccttcgccatcgccgtcgatgccaacggccggggcacc
ggttccggccggtcgatctcgggtttcgatctcggtcggatggtgcgcatggctgtggag
caggggctgctggtcaagggcggaggccatgcgatggccgccggcctgacggtgacgcgc
gagaagctctcggcgcttcgggccttctttgaggaccacgcccgcgatgccgtcgaggcg
ctcgccgccgacgcggtgctgaagatcgacggcgcgctcagcgcttctggcgccacgctt
gacctgatcgaccggctggaggcggcgggtccctacggctccggccatccgcagccgatc
ttcgcgctgccgcagcatcgggtgcgcgacgcgcgcgtgatcggcgcaggcggccatgtg
aaggtgcggcttgaaagcgcggaggggacggcgctggatggcatcgccttccgcgccgcc
gacaagcctctgggcgagcttctgcttggcagccgcgggcgcagcctgcatgtcgcggga
acgctttccggcgaccattggcagggccagcgccgcgttcagctgcgaatcattgatgcg
gccaatccgtcataa
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