Martelella mediterranea: Mame_03802
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Entry
Mame_03802 CDS
T04757
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
mmed
Martelella mediterranea
Brite
KEGG Orthology (KO) [BR:
mmed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mmed03009
]
Mame_03802 (rlmD)
Enzymes [BR:
mmed01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Mame_03802 (rlmD)
Ribosome biogenesis [BR:
mmed03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Mame_03802 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
TRM5-TYW2_MTfase
MTS
Methyltransf_31
Cons_hypoth95
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
AQZ53104
UniProt:
A0A1U9Z614
LinkDB
All DBs
Position
4086871..4088127
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AA seq
418 aa
AA seq
DB search
MAAETVTIEKLGAKGDGVAQTPAGPVFVPFVLPGERITIARQKSSGAMLALLEPAAERVE
PACRHFGPDGKNGTCGGCSLQHLAPAPYHAFKRQVVIDALSAHGLDCPVEPLVTAAPGQR
RRATFSARKTEAGIVLGFSSPESHHIVEIEECPVLSPALFSRLPALRLLAGILASGSDPF
RIAVLETETGLDISFSGLKPPSEKRRQAATRAVMALKGIARLTYEDEIIVEPVRPALNIA
GTTVNPQPSGFAQATREAEEVMAGLVATHLKSAKHVADLFSGFGTFALRLAARSKVHAVE
FDAKALAALDIAVRNRQGLKTVTSERRDLFRRPLLARELAGFDGAVFDPPRAGAGEQAEE
LARSKVSKIAAVSCNPATLARDLRLLVDGGYRIERVIPIDQFLWSHHVEAIALLSRAK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgaaaccgtgaccattgaaaagctgggcgcgaagggcgatggcgtagcgcag
acgcctgcgggcccggtcttcgtgccgttcgtcctgcccggagagcgcatcacgatcgcc
cggcagaaatcctctggcgcgatgcttgcgcttctggagcctgcggccgagcgcgtcgag
cccgcctgtcggcatttcgggccggacggcaagaacggcacctgcgggggatgttcgctc
cagcatctggcacctgcgccctaccacgccttcaagcgacaggtcgtgatcgacgcgctt
tccgcccacggcctcgactgtccggtcgaaccgctggtcacggccgcccctggccagcgc
cgccgggcgaccttttcggcgcgcaagaccgaagccggcatcgtgctcggcttttcgagc
ccggaaagccatcacatcgtggagatcgaggaatgtccggtgctgtcgccggcgctgttt
tcccgcctgcccgccctgcgccttctggccggcattctggcaagcggtagcgacccgttc
cggatcgccgtcctggaaaccgaaacaggcctcgacatcagtttctcgggcctcaagccg
ccatcggaaaagcgccggcaggcggcaacccgcgcggtgatggcgttaaagggcatcgcc
cgcctgacctatgaggacgagattatcgtcgaaccggtccgccctgccctcaatatcgcc
ggaaccacggtcaacccgcagccctccggtttcgcccaagcgacgcgagaggccgaggag
gtgatggcggggctggtggcaacgcatctgaaaagcgccaaacatgtcgccgatctcttc
agcgggtttggcacatttgccctgcggctggccgcgagatcgaaggttcatgccgtcgag
ttcgacgcgaaggcgctcgccgcgctcgatatcgcggtgcgcaaccgccaggggctgaag
acggtgacgagcgaacggcgcgacctcttccgccgccctttgcttgcacgcgaactggcg
ggcttcgacggcgcggtgttcgacccgccgcgcgccggcgcgggcgaacaggccgaggaa
ctggcccgctcgaaagtctccaagatcgccgcggtctcctgcaaccccgccacgcttgcc
cgggatctccggcttctcgtggatggcggctaccggatcgagcgggtcattccgatcgac
cagttcctctggtcccatcacgtggaagcgatcgcgcttctcagccgggcaaaataa
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