Martelella mediterranea: Mame_03956
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Entry
Mame_03956 CDS
T04757
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mmed
Martelella mediterranea
Pathway
mmed03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mmed00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Mame_03956 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmed03021
]
Mame_03956 (rpoA)
03400 DNA repair and recombination proteins [BR:
mmed03400
]
Mame_03956 (rpoA)
Enzymes [BR:
mmed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Mame_03956 (rpoA)
Transcription machinery [BR:
mmed03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Mame_03956 (rpoA)
DNA repair and recombination proteins [BR:
mmed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Mame_03956 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
IDH
Motif
Other DBs
NCBI-ProteinID:
AQZ53257
UniProt:
A0A1U9Z6C2
LinkDB
All DBs
Position
complement(4244952..4245962)
Genome browser
AA seq
336 aa
AA seq
DB search
MIQKNWQELIKPSKVEFTSSGPKKATLVAEPLERGFGLTLGNALRRILLSSLRGAAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIAIRMEGDEAKRMVVRKQGPGVVTAGDIQTVG
DIEILNPDLVLCTLDEGAEIRMEFTVNNGKGYVPAERNRAEDAPIGLIPVDSLYSPIRKV
SYKVENTREGQVLDYDKLLMTIETDGSVTGEDSVAFAARILQDQLSVFVNFEEPQKDTEE
DDVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPAWPPENIDDLAKRYEDQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatacagaaaaactggcaggaactgatcaagccgtcgaaggtggaattcacctcgagc
ggcccgaagaaggcgacgctcgtcgccgagccgctggaacgcggcttcggcctgacgctc
ggcaatgcgctgcgccgcatccttctgtcctcgctgcgcggcgctgccgtgaccgcggtt
cagatcgatggcgttctgcatgaattctcgtcgatccccggcgttcgcgaagatgtcacc
gacatcgtcctgaacatcaaggaaatcgccatccgcatggaaggcgacgaggccaagcgc
atggtcgtgcgcaagcagggcccgggcgttgtcaccgccggcgacattcagacggttggc
gatatcgagatcctgaaccctgatctggtgctctgcacgctcgatgaaggcgctgaaatc
cgcatggaattcaccgtcaacaacggcaagggctatgtgccggccgagcgcaatcgcgcc
gaagacgcgccgatcggcctgatcccggtcgacagcctctattcgccgatccgtaaggtc
tcctacaaggttgagaacacccgcgagggccaggttctcgactatgacaagctgctgatg
accatcgaaaccgatggttcggtcaccggcgaggattcggtcgcattcgccgcccgcatc
ctgcaggatcagctctcggtcttcgtcaatttcgaagagccgcagaaggataccgaggaa
gacgacgtcaccgaactcgccttcaacccggcccttctcaagaaggtcgacgaactcgag
ctttcggtccgttcggccaactgcctgaagaacgacaacatcgtttacatcggcgatctc
atccagaagacggaagcggaaatgctgcggaccccgaatttcggccgcaagtcgctgaac
gagatcaaggaagtgctggcctccatgggcctgcatctgggcatggaagtgccggcctgg
ccgccggaaaatatcgacgacctcgccaagcggtacgaggatcagtactaa
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integrated database retrieval system
