Martelella mediterranea: Mame_04016
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Entry
Mame_04016 CDS
T04757
Symbol
dacD
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase DacD precursor
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
mmed
Martelella mediterranea
Pathway
mmed00550
Peptidoglycan biosynthesis
mmed01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mmed00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Mame_04016 (dacD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mmed01002
]
Mame_04016 (dacD)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mmed01011
]
Mame_04016 (dacD)
Enzymes [BR:
mmed01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Mame_04016 (dacD)
Peptidases and inhibitors [BR:
mmed01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
Mame_04016 (dacD)
Peptidoglycan biosynthesis and degradation proteins [BR:
mmed01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Mame_04016 (dacD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
SPOR
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
AQZ53316
UniProt:
A0A1U9Z6M7
LinkDB
All DBs
Position
4298227..4299690
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AA seq
487 aa
AA seq
DB search
MQRQATSRFPKSRFSAAAILLAAFTILLTGFAPARADSNDAAIVIDVNTGKVLYGENPDA
PRYPASLTKMMTLYLTFEALDDGRITLDTRVPFSKNASAEPPTKLGIGAGNSISVETAIY
SLVTRSANDAATALGELLGGSETNFAKMMTNKAHSLGMTKTTYRNAHGLPNSAQKTTARD
QARLGIALRQHFPQYYKYFGTRSFKFGKTTIGNHNRLLGNVQGVDGIKTGYTNASGFNIA
TSAISGNRSIVAVVMGGATSASRDKWATRLITTYLPKASNGRKQFVIARTRSTGGPIVAA
AMVFPKTGPIPYARPTSQTGGVALAYANDNTAAAAPAVLSGPQAELIANVPVPSARRAPD
NDDGLSVEDILETADGVADAVGSAIVPAAEASQPDTSIKTGSVRASRGWVVQVGTAATPE
AAKALLASTKGKAGGALDSSEPFALAYNTGGQSVYRARFGGFSDQEEAVRACRALKQNGV
SCWASLQ
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcagagacaggcaacaagccgattccccaagagccggttttcagcggccgcgatcctt
ctcgcggctttcacgattctgctgaccgggtttgccccagcgcgcgccgacagcaatgac
gccgccatcgtcatcgacgtcaacaccggcaaggtgctttacggcgaaaaccccgacgcg
ccgcgctatccggcctcgctgaccaagatgatgacgctctacctcaccttcgaggcgctg
gacgacggccgcatcacgctcgatacccgggtccctttctccaagaacgcatctgccgag
ccgccgaccaagctcggcatcggcgctggcaactcgatcagcgtcgagacggcgatctat
tcgctggtgacccgctccgccaatgacgcggcgaccgcgcttggcgaactcctcggcggt
tcggaaaccaatttcgccaagatgatgaccaacaaggcgcactcgctgggcatgacgaag
acgacctaccgcaatgcacatggcctgccgaacagcgcgcagaagaccacggcgcgcgac
caggcccgcctcggcatcgcgctgcgccagcattttccgcagtactacaaatatttcggc
acccgcagcttcaagttcggcaagaccacgatcggcaaccacaaccgtcttctcggcaat
gttcagggcgtcgacggcatcaagaccggctacaccaacgcctccggcttcaacatcgcg
acctcggcaatttccggcaaccgctcgatcgttgccgtggtcatgggcggcgcgacatcc
gccagccgcgacaagtgggcgacccggctgatcaccacctacctgcccaaggcctccaat
ggccgcaagcagttcgtgatcgcccgcaccagaagcaccggcggcccgatcgtcgcagcc
gccatggtattcccgaagaccggcccgatcccctatgcacggcccacgagccagaccggc
ggtgtcgcgctcgcctatgccaacgacaacacggccgccgccgccccggcagtcctctcc
ggaccgcaggccgagctgatcgcaaacgttccggtgccgagcgcgcgcagagcgcccgac
aatgatgacggtctgagcgtcgaggacattctcgaaaccgccgatggcgttgccgatgcg
gtgggaagcgcgatcgtgccggccgcggaggcttcgcagcccgacacttcgatcaagacc
ggttcggttcgcgcgtcgcgcggctgggtggttcaggtcggcaccgccgcaacgcccgag
gccgccaaggcgcttctcgccagcaccaagggcaaggccggcggcgcgctcgacagttcc
gagcccttcgcgctcgcctacaataccggcggccagtcggtctaccgcgcccgcttcggc
ggcttctccgatcaggaggaggccgtgcgcgcctgccgcgcgctgaagcagaacggcgtg
agctgctgggcaagcctccagtag
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