Martelella mediterranea: Mame_04022
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Entry
Mame_04022 CDS
T04757
Symbol
pcrA_1
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mmed
Martelella mediterranea
Pathway
mmed03420
Nucleotide excision repair
mmed03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mmed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mame_04022 (pcrA_1)
03430 Mismatch repair
Mame_04022 (pcrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmed03400
]
Mame_04022 (pcrA_1)
Enzymes [BR:
mmed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mame_04022 (pcrA_1)
DNA repair and recombination proteins [BR:
mmed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mame_04022 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
Mame_04022 (pcrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
DUF3553
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AQZ53322
UniProt:
A0A1U9Z6W4
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All DBs
Position
4306271..4308706
Genome browser
AA seq
811 aa
AA seq
DB search
MNQGDDNIPFFDEDDAPQPAAPARSGLAARAMAARRAPDAPDYLSGLNPEQRDAVETTEG
PLLVLAGAGTGKTRVLTTRIAHILASGRAYPSQILAVTFTNKAAREMKERIGALVGGAVE
GMPWLGTFHSIGVKLLRRHAELAGLRSDFTILDTDDVLRLLKQLIQAEGLDDKRWPARQF
AGMIDNWKNKGLTPKTIAEGDARAFANGRGRELYQAYQDRLKTLNACDFGDLLLHPIELF
RQHPDILKEYHKRFRYILVDEYQDTNTAQYMWLRLLAQRPAGDEGPINICCVGDDDQSIY
GWRGAEVDNILRFEKDFRGAKVIRLERNYRSTAHILGAAGNLIAHNEGRLGKTLFTERTD
PDDSKVQVHAAWDSEEEARAIGEEIEQYQKQGEALNDMAILVRASFQMREFEDRFVTLGL
NYRVIGGPRFYERLEIRDAMAFFRLTCQPADDLALERIINTPKRGLGDASVRKVHDYARE
RNIPMLAAARELIDTDELKPKPRKALFDVVTQFDRWQDLLETTPHTELAEQILDESGYTE
MWQNDRSAEAPGRLENLKELIRSMEGFESMRGFLEHVSLVMDTENNEDLDAVSIMTLHSA
KGLEFKTVFLPGWEEGLFPHQRALDESGRAGLEEERRLAYVGITRAKRHCHIWFVSNRRI
HGLWQSTMPSRFLDELPEDHVEVGETEVSYGGYGQSRFDRAEPFSNTYATPGWKRAQGNR
SDATRDNWGTRSGHAVERIGYGESGPRGRTIEGELVARSTGEEASAYAIGDRVFHMKFGN
GNITSIEGNKLTIDFDKAGRKRVLDGFVKPV
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaggtgacgacaatattccgtttttcgacgaagacgatgcgccgcagcccgca
gcgcccgcccgctccggccttgccgcacgagcgatggccgcgcgccgcgcgccggatgcg
cccgattatctctccggcctcaaccccgagcagcgcgacgccgtggaaaccaccgagggg
ccgcttctggtgcttgcgggtgcgggcaccggcaagacccgggttctgaccacccgcatc
gcccatattcttgcttccggaagggcctatcccagccagattcttgccgtgactttcacc
aacaaggccgcgcgcgagatgaaggaacggatcggcgcgctggtgggcggcgcggtcgag
ggcatgccctggctcggcacgtttcactcgatcggcgtcaagcttctgcgccgccatgcc
gagcttgccggtctgcgctccgacttcaccattctcgataccgacgacgtgctcaggctg
ctcaagcagttgatccaggccgagggtctcgacgacaagcgctggccggcgcggcagttc
gccggcatgatcgacaactggaagaacaagggcctgacgccgaagacgattgccgagggc
gacgcccgtgcctttgccaatggccgcggccgcgaactctatcaggcctatcaggaccgg
ctgaagacgctcaacgcctgcgatttcggcgatcttctgctgcacccgatcgaactgttc
cgtcagcatccggatatcctgaaggaataccacaagcgcttccgctacattctggtggac
gagtatcaggacaccaacaccgcgcaatatatgtggctgcggctcctggcccagcggccc
gccggcgacgaaggtccgatcaacatctgctgcgtgggcgatgacgaccagtcgatctat
ggctggcgcggcgcggaggtcgacaatattctccgcttcgagaaggatttccggggcgcc
aaggtgatccggctggagcgcaattaccgctcgaccgcgcatattctgggggccgccggc
aatctgatcgcccataatgagggccgtctcggcaaaacgctgttcaccgaacgcaccgat
cccgacgacagcaaggtgcaggttcacgccgcctgggattccgaggaggaagcccgcgcg
atcggcgaggagatcgagcagtaccagaagcagggcgaggcgctgaacgacatggcgatc
ctggtgcgcgcctcgttccagatgcgcgaattcgaggatcgcttcgtcacgctcgggctc
aactaccgcgtcatcggcggcccgcgcttttacgagcgcctcgaaattcgcgacgccatg
gcgtttttccgcctcacctgccagccggccgacgatctggcgctggagcggatcatcaac
acgccgaagcgcggccttggcgatgccagcgtgcgcaaggtccacgactatgcccgcgag
cgcaacattccgatgctggcggccgcccgcgagctgatcgacactgatgagctgaagccg
aagccacgcaaggcgctgttcgacgtcgtcacccagttcgaccgctggcaggacctgttg
gaaaccacgccgcataccgagcttgccgagcagatcctcgacgagagcggctataccgag
atgtggcagaacgaccggtcggcggaagcgccgggccggctcgaaaacctgaaggagttg
atccgctccatggaaggtttcgagagcatgcgcggctttctcgaacatgtctcgctggtg
atggacaccgaaaacaacgaagacctcgatgccgtctcgatcatgacactgcattcggcc
aaggggctggagttcaagaccgtgttcctgcccggttgggaggaaggcctgtttccgcac
cagcgcgcgctcgacgagagcggccgcgcggggctggaggaagagcgccggcttgcctat
gtcggcatcacccgcgccaagcgccactgccatatctggttcgtctccaaccgccgaatc
cacgggctctggcaatcgaccatgccgtcgcgctttcttgatgaactgccggaagaccat
gtcgaggtcggcgagaccgaggtgtcctatggcggctacggccagtcgcgcttcgaccgg
gccgagccgttttccaacacctatgccacgccgggctggaagcgtgcgcagggcaaccgc
tccgacgccacccgcgacaattggggcacgcgctccggccacgcggtggagcggatcggc
tacggcgaaagcggcccgcgcggacgcaccatcgagggcgaactggtggcgcgctccacc
ggcgaggaggcttccgcctacgccatcggcgaccgcgtcttccacatgaagttcggcaat
ggcaacatcacctcgatcgaaggcaacaagctgaccatcgatttcgacaaggcgggccgc
aagcgcgtgcttgatggctttgtgaagccggtctga
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