Marinobacter metalliresistant: NLK58_10160
Help
Entry
NLK58_10160 CDS
T10462
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mmee Marinobacter metalliresistant
Pathway
mmee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NLK58_10160 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmee03019
]
NLK58_10160 (pnp)
03016 Transfer RNA biogenesis [BR:
mmee03016
]
NLK58_10160 (pnp)
Enzymes [BR:
mmee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NLK58_10160 (pnp)
Messenger RNA biogenesis [BR:
mmee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NLK58_10160 (pnp)
Transfer RNA biogenesis [BR:
mmee03016
]
Prokaryotic type
tRNA degradation factors
NLK58_10160 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH_2
KH-I_KHDC4-BBP
OB_RRP5_4th
APC_15aa
Motif
Other DBs
NCBI-ProteinID:
WZF90521
UniProt:
A0ABZ2W6U9
LinkDB
All DBs
Position
complement(2170226..2172361)
Genome browser
AA seq
711 aa
AA seq
DB search
MQEFFVDLKPFKKSFELGGKTVTLETGRIARQATGSVLVTVDDISVLGTVVGAKEAKPGQ
PFFPLTVNYFEKTYAVGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPNGFMNEVQVI
TTVMSSSKNQDPDIAAMLAASAALSISGIPFDGPIGASRVGYTNERGYFLNPTFEELQTS
LLDMVVAGTEDAVLMVESEAKGLTEDQMLGGVLYAHQEMQVAVAAIKEFAAEIGKPRWDW
QPAAENTELLNAVKAEASAAIEEAYGIRDKMERYARLGEIKTALVEKLAGEEEGQPSADE
VKKYFGKVEKAIVRHQVIEGKPRIDGRDNKTVRPIEIEVGVLPSVHGSALFTRGETQAIV
TTTLGTSRDVQIIDALEGERKDPFLFHYNFPPYSVGEAGRVGTPGRREVGHGRLAKRGVL
AVMPTLEEFPYAIRAVSEITESNGSSSMASVCGSSLALMDAGVPIKAPVAGIAMGLVKED
DKFAILTDILGDEDHLGDMDFKVAGTQEGVTALQMDIKINGITDEIMELALEQAHAARLH
ILGEMNKVISAPRAELSSRAPSITTIKINPEKIRDVIGKGGSMIRSICDETGASIDLDDD
GNVKIYADNQEAAQAAVNRVKEITAEIEVGAIYKGRVERIVDFGAFVNILPGKDGLVHIS
QISDRRIENVTDELSEGQEVLVKVLDVDNRGRVKLSMKEIKEGDQPTDFSA
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagttttttgtggatctgaaacctttcaagaaatcgtttgagcttggcggcaag
accgtcactctggaaaccggccgtattgcccgccaggccaccggttcggtgctggtaacc
gttgatgatatttcggtgctcggtaccgttgttggcgccaaggaagccaagcctggccag
ccgtttttcccgctgaccgtgaactacttcgagaagacctacgccgtgggcaaaatcccc
ggtggtttcttcaagcgtgaaggtcgtccttccgagaaggaaaccctgacgtcccgcctg
atcgaccgtccgattcgtccgctgttcccgaacggcttcatgaacgaagttcaggtcatt
accacggtcatgtcctccagcaagaatcaggatccggatattgccgcgatgctggccgcc
tcggcggcgctgtctatctccggcatcccgttcgatggcccgatcggcgcctcccgcgtt
ggttacaccaacgagcgcggctacttcctgaacccgacgtttgaagagctgcaaacctcc
ctgctggacatggtggtggccggtaccgaagacgcggttctgatggttgagtccgaagcc
aagggcctgacggaagaccagatgctgggtggtgttctgtacgcccatcaggaaatgcag
gtggccgtagccgcgatcaaggaatttgccgctgaaatcggcaagccgcgctgggactgg
cagccagcggcagagaacactgagctgctgaatgccgtcaaggccgaggcctccgcagcc
atcgaggaagcctacggcattcgcgacaagatggagcgctacgcgcgtctgggcgaaatc
aagacggcactggttgaaaaactggccggcgaagaggaaggtcagccttccgcggatgaa
gtcaaaaagtattttggcaaggtggagaaagccatcgttcgtcatcaggttatcgagggc
aagccccgcatcgatggccgtgacaacaaaaccgttcgcccgatcgaaatcgaagtgggt
gttctgcccagtgttcacggttccgccctctttacccgtggcgagacccaggccatcgtg
accactacgctgggtacctcccgcgatgtgcagatcattgatgccctggaaggcgagcgt
aaggacccgttcctgttccactacaacttccctccgtattcggttggtgaagcaggccgt
gttggcaccccgggccgtcgtgaggttggtcatggtcgtctggccaagcggggcgttctg
gcggttatgccgactctggaagagttcccgtatgcaatccgtgcggtttccgagatcact
gaatccaacggttccagctccatggcttcggtctgtggttccagcctggcgctgatggat
gcgggtgtgccgatcaaggcaccggttgccggtattgccatgggtctggtcaaggaagac
gacaagtttgcgattctgaccgacatcctgggtgacgaagatcacctgggcgacatggac
ttcaaggttgccggtacccaagagggcgtgactgccctgcagatggatatcaagatcaac
ggcatcaccgacgagatcatggagcttgctcttgagcaggcgcacgcagcccgtctgcac
attctgggcgagatgaacaaggttatctccgctccccgcgccgagctgtcttcccgtgcg
ccgagcatcaccaccatcaagatcaatccggagaagatccgtgacgttatcggtaagggc
ggttccatgattcgctccatctgtgacgaaaccggtgcttccattgatctggatgacgac
ggtaacgtgaagatctacgcggataaccaggaagcagcccaggcggcggtgaaccgggtg
aaggaaatcactgcggagatcgaggttggcgctatctacaagggccgcgttgagcgcatt
gtggacttcggtgccttcgtcaatatcctgcctggcaaggatggtctggtgcacatttcc
cagatttctgatcgccgcatcgagaatgtgactgacgagctgagcgaaggtcaggaagtt
ctggttaaggttctggatgtcgacaaccgtggccgcgtcaagctgtccatgaaggaaatc
aaggaaggcgaccagccgaccgatttctctgcctga
DBGET
integrated database retrieval system
