Marinobacter metalliresistant: NLK58_13730
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Entry
NLK58_13730 CDS
T10462
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mmee Marinobacter metalliresistant
Pathway
mmee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NLK58_13730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmee03019
]
NLK58_13730
Enzymes [BR:
mmee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NLK58_13730
Messenger RNA biogenesis [BR:
mmee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NLK58_13730
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
DUF8086
Utp25_C
HEM4
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WZF87403
UniProt:
A0ABZ2VY46
LinkDB
All DBs
Position
2951588..2952910
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AA seq
440 aa
AA seq
DB search
MSFSSLGLSEQLVRATTDQGYETPSPIQAQAIPAVLSGRDVMAAAQTGTGKTAGFTLPLL
QRLGETSRTGKGPRALILTPTRELAAQVHDSVNLYSKYVPTKAAVVFGGVKINPQMMKLR
KGLDVLVATPGRLMDLYQQNAVRFNEVEILVLDEADRMLDMGFIRDIRKILALLPAKRQN
LLFSATFSNEIRTLAEGLLDNPVQVEVAARNTAAENIRQSVYPVDQSQKTALLSKLVRDN
SWDQVLVFTRTKHGANRLTQKLEKDGITAAAIHGNKSQGARTRALADFKAGEVRVLVATD
IAARGLDIKQLPQVVNFELPNVPEDYVHRIGRTGRAGESGHALSLVSADEGKLLTGIERL
IKKQLPRKSMEGFEPTNNLPLKPKAKADPSRARTRSSNGAGNGRPGGKPKSFGDKPGGRS
GGRSQNGGGQRSRSAQRQSA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagtttttcttcactcggtttgtccgagcagctggtccgtgccaccaccgatcagggt
tatgaaacaccgtccccaattcaggcccaggccatccccgccgttctttccggccgggat
gtgatggctgccgcccagactggcaccggcaaaaccgccggtttcaccctgccgctgttg
cagcgtcttggcgaaacctcccgtaccggcaaggggccccgtgccctgatcctcacgccg
acccgggagttggcggcacaggttcacgacagcgtgaatctttacagcaaatacgttcct
accaaggccgctgtggttttcggtggtgtgaaaatcaatccgcagatgatgaagctgcgc
aagggtctggacgtattggtggcaacaccgggccggctgatggacctgtatcagcaaaac
gctgtgcgcttcaacgaagtggaaattctggtgctggacgaagccgaccgaatgctggac
atgggctttatccgcgacatccgcaagattcttgcgctgttgccggccaagcgccagaac
ctgctgttctccgccaccttctctaacgagatccgtactcttgcggaaggcctgctggat
aacccggtgcaggtggaagtagcggcccgtaacaccgctgcggaaaacatcaggcagtct
gtctacccggtggatcagagccagaaaacggcgctgctgagcaagctggtacgtgacaat
agctgggaccaggtactggtctttacccgtaccaagcacggcgccaaccgcctgacccag
aagctggagaaggacggtattaccgccgccgccattcacggcaacaagtcgcagggtgcc
cgcacccgtgcgctggctgacttcaaggccggcgaagtgcgtgtgctggtggcgacggac
atcgcagcccgtggtctggacatcaagcaactgccccaggtagtgaactttgaactgccc
aacgtaccggaagattacgtgcaccgtatcggccgtaccggccgtgctggtgagagcggt
catgcgttgtcactggtgagtgcggatgaaggcaaactactgacgggtatcgaacggctg
atcaagaagcagttgccgcgcaagagcatggaaggcttcgagcccaccaacaacctgccg
ctgaagcccaaggccaaggcagaccccagccgcgcccgtacccgcagtagtaacggcgct
ggcaatggccggcccggaggcaagccgaaaagctttggggacaagccaggtggccgcagt
ggtggccggagccagaatggcggcggtcagcgaagccgctcagcccagcgccagagtgcc
tga
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