Marinicellulosiphila megalodicopiae: TYM08_P0954
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Entry
TYM08_P0954 CDS
T10978
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mmeg Marinicellulosiphila megalodicopiae
Pathway
mmeg03030
DNA replication
mmeg03410
Base excision repair
mmeg03420
Nucleotide excision repair
mmeg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TYM08_P0954
03410 Base excision repair
TYM08_P0954
03420 Nucleotide excision repair
TYM08_P0954
03440 Homologous recombination
TYM08_P0954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmeg03032
]
TYM08_P0954
03400 DNA repair and recombination proteins [BR:
mmeg03400
]
TYM08_P0954
Enzymes [BR:
mmeg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TYM08_P0954
DNA replication proteins [BR:
mmeg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
TYM08_P0954
DNA repair and recombination proteins [BR:
mmeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
TYM08_P0954
NER (nucleotide excision repair)
GGR (global genome repair) factors
TYM08_P0954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
BCE00891
LinkDB
All DBs
Position
1144753..1147605
Genome browser
AA seq
950 aa
AA seq
DB search
MSQASDQSLAPIVLVDGSSYLFRAYHALPPLMNKQGMATGAAKGVINMMRSLLLNYPQSP
VIVVFDAKGDTFRNEIYDQYKANRPPMPDDLREQIEPIHQMIKAMGLPLIMESGVEADDV
IGTLALECTNLGRDCVISTGDKDMAQLVTEHVTLLNTMKNELLDVDGVKEKYGFGPEYMI
DYLGLMGDKVDNIPGVPGVGDKTATGLIQGLGSIKNIYENLDKVKDLAFRGAKTMAKKLE
ANQELAELSYVLATIKCDVKLEKNVLEFTHQPQDDAALLALFQQMEFKGWIKSLSEQMQA
NGQTVEIASEDIAITRGQIHDSEMVEVLLEHCETVHYEQIKDMQKLADVLYNIKQHKKMA
VDFVFSKAHYLNNHLLAISLSSEAGTAFTICFDHELYKDELLIEQEVIEQLKPLFERYDI
KKTVADLKQTLHYLSRQNIKPSNIANDISIQSFVFNSTIKRDKSLDKHFSVLSVDNLIRV
YGSNIEESYFPKTYAEIAGKFGKKQLTWSQLEFDVMVDYLSARADYILRLGEFFETQLKQ
TGELFNVYQSIELPLVPALAQIEQNGAYLDVNLVNQLTHDFTTRMKEYELRAFELAGSEF
NIDSPKQIGEVLFEKLEIPVIKKTPTGQPSTAEEVLVELSKEYELPDLILKYRHLKKLVS
TYTQSLPLMVDTKTQMIHTSYHQNGAQTGRLSSTEPNLQNIPIRSEEGRAIRKAFCARPG
YKIVAADYSQIELRIMTHLCADTNLLYAFNNGLDVHKSTAAEVFGVPLDEVTNDQRRSAK
AINFGLIYGMSAFGLAAQLDISRSDAKVYVESYFEKYPEVKRYMDQTKMQANEDGFVETI
MGRRLYLPDINSNKGMLKAAAERTAINAPMQGSAADIIKLAMNDVQYWLKKEDIQANLIM
QVHDELVFEVKEEELDRLISGVKIRMQSAASLSVPLIVDVGVGDNWDEAH
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaagcttcagaccaatcgttagcaccaattgtacttgttgatggatcatcgtac
ttatttcgtgcctatcatgcattacctccattaatgaacaaacaaggtatggcgactggg
gctgccaaaggggtcatcaatatgatgcgttctttgttgttaaattaccctcaatccccc
gtaattgtagtgtttgatgcaaaaggggatacatttcgtaatgaaatttatgaccaatac
aaagcaaaccgcccgccgatgccagatgatttaagagaacaaattgaacccattcaccaa
atgattaaagcgatggggttacctttaattatggaatcgggagtggaggcggacgatgtg
atcggcacattagcattagagtgtaccaatcttggtcgagattgtgttatttcaacgggc
gataaagatatggctcaacttgtaactgagcatgtcacattattaaataccatgaaaaat
gagctactagatgttgatggtgtaaaagaaaaatacggatttggcccagagtacatgatc
gattatttaggcctaatgggcgataaggtcgataatattccaggtgtgccaggagtggga
gataaaaccgcgaccggtttaatacaagggctgggcagcataaaaaatatatatgaaaat
ttagataaagtgaaagatctagcatttcgtggtgcaaaaaccatggctaaaaaattggaa
gccaaccaagaacttgctgaattatcttatgtgttagccacaattaaatgcgatgtgaag
cttgaaaaaaacgttttagaatttacgcatcagcctcaagatgatgcagcattactcgcg
ttgtttcaacaaatggaatttaaaggttggatcaaatctctaagcgaacagatgcaagca
aatggacaaacggttgaaattgctagtgaagatatagcgattacgcgcggacaaatccat
gacagtgagatggttgaagtattattagagcattgtgaaactgttcactatgaacaaatt
aaagacatgcaaaaacttgcagatgtgttgtataacatcaaacaacataaaaaaatggcc
gtggattttgtgttctctaaagcacattatttaaataatcacctgttggcaatcagttta
agttctgaagcaggcactgcatttacgatttgttttgatcatgaattatataaagatgaa
ttattaattgagcaagaggttattgaacaattaaaaccattgtttgaacgatatgacatt
aaaaaaaccgtcgcagatttaaaacaaacgttacattacttgtctcgtcaaaacattaaa
ccaagtaatattgcaaatgatatttctattcagtcttttgtttttaattcaaccattaag
cgagataaatccttagataaacatttttcagtattaagtgtcgataatttaataagagta
tatggttcaaatattgaggaatcatacttcccaaaaacctatgcagaaatagcagggaaa
tttggtaaaaaacaattaacttggagtcagcttgagtttgatgtgatggtcgattattta
agtgctcgtgcagattatattttgcggttaggtgagtttttcgaaacacaattaaaacaa
actggcgagttatttaatgtttaccaatccattgaattacctcttgtgcctgcattggcg
caaatagaacaaaatggtgcgtatttagatgtcaatcttgtaaatcaattgacccatgat
tttacaactcgcatgaaagaatacgaattacgcgcttttgaattagcaggcagtgaattt
aacattgactcacctaaacaaattggtgaggtgttatttgaaaaattagaaatacccgtt
attaaaaaaacgccaacgggacagccatcaacagcagaagaagtattagttgaattatca
aaagaatatgagttacctgatttaattttaaagtatcgtcatcttaaaaaattagtgtcc
acttatactcaatctttaccattaatggtcgataccaaaactcaaatgattcatacctcg
taccatcaaaatggtgcgcaaaccggtcgattgtcttctactgaacctaacttacaaaat
attcctattcgctccgaagaagggcgtgcgattcgtaaagcattttgtgcgcgtcctgga
tataaaatagtagcggcggattactcgcaaattgaattacgcatcatgacgcatttatgt
gcggatacgaatttattatatgcatttaataatgggttagatgttcataaatcaaccgca
gcagaagtatttggtgtgcccttagatgaagtaaccaatgaccagcgtcgaagtgcaaag
gccattaactttggtttgatttatggtatgagcgcatttggtttagcggcccaattggat
atttcaagaagtgatgcaaaggtttatgtagaaagttattttgaaaaatacccagaagta
aaacgctatatggatcaaactaaaatgcaggccaatgaagatgggtttgttgaaactatt
atgggacgtagattgtatctacctgacattaactcaaataaaggcatgttaaaagccgca
gcagagcgcaccgcgattaatgcgcccatgcaaggcagtgccgcagacatcatcaaactt
gcaatgaatgatgtgcaatactggcttaaaaaagaagacattcaagcaaacttaattatg
caagtgcacgatgaattagtgtttgaagtaaaagaagaagaattagatcgattgatatct
ggtgttaaaatcagaatgcaaagcgcggcaagtttgtccgtgccattgattgtggatgtc
ggtgttggtgataattgggatgaggcgcattaa
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