Marinicellulosiphila megalodicopiae: TYM08_P1326
Help
Entry
TYM08_P1326 CDS
T10978
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mmeg Marinicellulosiphila megalodicopiae
Pathway
mmeg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmeg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TYM08_P1326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmeg03019
]
TYM08_P1326
Enzymes [BR:
mmeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TYM08_P1326
Messenger RNA biogenesis [BR:
mmeg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TYM08_P1326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
SNF2-rel_dom
AAA_22
SWI2_SNF2
Helicase_RecD
Helicase_C_2
UvrD-helicase
Flavi_DEAD
CMS1
AAA_25
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BCE01263
LinkDB
All DBs
Position
complement(1630186..1631430)
Genome browser
AA seq
414 aa
AA seq
DB search
MTFSSLISNPNLLKAVTQSGYETPTPIQEQAIPAILAGSDIMAGAQTGTGKTAAFALPLL
SLLDKKQSVDKKLRVLVLTPTRELAQQVFKSFEDYSQFTQINIALAYGGVSIKPQAKQIA
NDAQVLVATPGRLLDHIENGSVSLQDLQYLVFDEADRMLDMGFQTEIKNILKRAPKNRQT
LLFSATFDDAIFDLSKTLLNDPKLIEVSERNAAAAEVEQIVYTVDEDRKRELTSHLIGMK
NWRQVLIFTRTKQTADLLAKEMCKDGIKAVSIHGDKTQGARNKALAQFKEGSARALVATD
VAARGLDIVDLQYVINFELPYIAEDYIHRIGRTGRAGKTGLAVSLLSRGEEWLLEAVEKV
LDSKLPQECLPGYELDLTKKPGQNSFEDNNKNASDKKRHKKKYSDNSKGRRPRR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaccttttcatcattaatttctaaccccaatctattaaaagccgtcacgcaatctggc
tacgaaacccccacccccattcaagaacaagccattcctgccatacttgcgggctctgac
attatggccggtgcacaaaccggcacaggtaaaaccgcagcgtttgctttgccgttatta
agtttgttagataaaaaacaatccgttgataaaaaattacgcgtattggtgctcacccct
actcgtgaacttgcccaacaggtatttaaaagttttgaagactactcacagtttactcaa
ataaacatcgcccttgcctacggtggcgtcagcattaaaccacaggccaaacaaattgca
aacgacgctcaagtactcgttgccacaccgggtcgattattagatcacattgaaaatggg
tctgtttcgttacaagatttacagtatttagtgtttgatgaggccgacagaatgttagac
atggggtttcaaacagaaatcaaaaatatactcaaacgtgcccctaaaaaccgccaaaca
ttattattctctgccacctttgacgatgcaatttttgatttgagtaaaacattattaaat
gatccaaaactgattgaagtgagcgagcgaaatgctgcggcagctgaagttgaacaaatt
gtttacacagtggatgaagacagaaaacgagaattaacgtcgcatttaatcggcatgaaa
aattggcgacaggtattaatttttacccgcaccaaacaaaccgccgatttgttagccaaa
gaaatgtgcaaagacggcatcaaagccgtgtcgattcacggtgacaaaactcaaggtgca
cgaaacaaagcattagcccaatttaaagaaggcagcgcacgtgcattagtagcaaccgat
gtcgcagcacgtggattagacatagtcgatttacaatacgtcatcaattttgagttgcct
tatatagcagaagattacatccaccgcataggccgaacaggacgcgcaggcaaaacaggt
ttggctgtctcgttattaagccgtggtgaagaatggttattagaggccgttgaaaaagta
ctagacagtaaattacctcaagaatgtttacccggttacgagttagatttaactaaaaag
cctgggcaaaattcatttgaagacaacaacaaaaacgcatcagataaaaaacgccataag
aaaaaatactcagacaattctaaaggtcgccgtcctcgccgataa
DBGET
integrated database retrieval system
