Marinicellulosiphila megalodicopiae: TYM08_P1453
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Entry
TYM08_P1453 CDS
T10978
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mmeg Marinicellulosiphila megalodicopiae
Pathway
mmeg03018
RNA degradation
Brite
Enzymes [BR:
mmeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TYM08_P1453
Messenger RNA biogenesis [BR:
mmeg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TYM08_P1453
Ribosome biogenesis [BR:
mmeg03009
]
Prokaryotic type
rRNA helicases
TYM08_P1453
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Other DBs
NCBI-ProteinID:
BCE01390
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Position
complement(1767546..1769336)
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AA seq
596 aa
AA seq
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MSTSFQDLGLAEPILQAISEIGYETASPIQEQSIPVLLEGRDIIGQAQTGTGKTAAFALP
LVTNIDPKAKGVQILVLAPTRELAIQVSEAFQTYCRHIKGFHVAPIYGGTGYDTQLRQLK
RGVQVVVGTPGRVMDHIRKGTLKLDNLQALVLDEADEMLRMGFVDDVEWVLEHTPKTRQI
ALFSATMPKEIRTIAQKHLNDPVEIKVKTKTETSENIRQRYWIVSGMHKLDALTRILEAE
TFDGIIIFVRTKTATVELAEKLNARGFAAAALNGDISQQIRERTVERLKNGKLDIVIATD
VAARGIDVPRVSHVINYDIPYDQESYVHRIGRTGRAGRAGDAILFVAPRERRLLKNIERM
TKQLIEPMNMPTASDINTQRINRFKSRISETLEQANLDMFFDIISQYKEENEVDETKLCA
ALASMAQGNTPLLLDENERINNRSFDDNDRDDRGSRSERGERPRRERKERTKGLKGHPDM
ETTTYKLEVGQNHGVKPGNIVGAIANEADIDSQYIGCIEIYPQFSTVDLPKGMPKEVMDV
LKNTMISGQKIKISEFSGERPEKAPRGNDHGEGGPRKPRSNTHHKRQRRSKPAPRD
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtccacatcttttcaagatctcggtttagcagaaccaattttacaagccattagtgaa
atcggttacgaaaccgcctcgcccattcaagaacaaagtattcctgtgttattagaaggt
cgagatattattggtcaagcacaaacgggtacgggtaaaactgccgcgtttgcattacca
cttgtgacaaatattgacccaaaagccaaaggcgtccaaattttagttttagcgcccact
cgtgaattagccattcaagtttctgaagcttttcaaacctattgtcgccatattaagggc
ttccatgtggcgcctatttacggtggcacaggttatgacacacagctacgccagttaaaa
cgcggcgttcaagttgttgtcggcacccctggtcgtgtaatggatcatatccgtaaaggc
actttaaaattagataatcttcaagctctagtactagatgaagcagatgaaatgcttcgt
atggggtttgttgatgatgttgaatgggttttggagcacacacctaaaacacgccaaatt
gcattattttcagcgacaatgccaaaagaaattcgtaccattgctcaaaagcatttgaac
gatccagttgaaatcaaagttaaaacaaaaactgaaacttctgaaaatatccgtcaacgt
tattggatcgtttcgggtatgcataaacttgatgcattaacccgtattctagaagcagaa
acctttgatggcattatcatttttgtacgtactaaaacggcaacggttgaattagctgaa
aaactaaatgcacggggctttgctgctgctgcattaaacggtgatatttcacaacaaatt
cgtgaacgtaccgttgagcgtttgaaaaatggcaaactagacatcgtgattgcaactgat
gttgccgctcgtggtattgacgttcctcgtgttagccatgttatcaactatgacattcca
tacgatcaagagtcttatgttcaccgtattggccgtactggtcgtgctggtcgtgctggt
gatgcaattttgtttgtggcaccacgcgagcgtcgtttacttaaaaacatcgaacgtatg
acaaagcaattgattgagccgatgaacatgccaacggcatcggacatcaacacacagcgc
atcaatcgttttaagtctcgtattagtgaaacacttgaacaagccaatcttgatatgttt
ttcgacatcatttctcaatacaaagaagaaaatgaagttgatgaaacaaaactatgtgca
gctttagcatcaatggctcaaggcaataccccattattattagatgagaacgaacgcatt
aacaatcgttcatttgatgataatgatcgcgatgatcgtggttctcgctcagaacgcggt
gaacgtcctcgtcgtgaacgtaaagaacgcactaaaggcttaaaaggccatcccgatatg
gaaaccacgacttataaattagaagtgggacaaaaccatggtgttaagccaggtaatatc
gtaggagccattgcaaacgaagcagacattgatagccaatacattgggtgtatcgaaatt
tatcctcaattctcgacggttgatcttccaaaaggcatgcctaaagaagtgatggatgta
ttgaaaaataccatgatttcaggtcaaaaaatcaagatttctgaattttctggtgaacgt
cctgaaaaagcacctcgcggtaatgaccatggagaaggcggcccaagaaagcctcgctcg
aacactcatcacaagcgtcaacgcagaagcaaaccagctccaagagattag
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