Marinicellulosiphila megalodicopiae: TYM08_P2139
Help
Entry
TYM08_P2139 CDS
T10978
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mmeg Marinicellulosiphila megalodicopiae
Pathway
mmeg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmeg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TYM08_P2139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmeg03019
]
TYM08_P2139
03110 Chaperones and folding catalysts [BR:
mmeg03110
]
TYM08_P2139
03029 Mitochondrial biogenesis [BR:
mmeg03029
]
TYM08_P2139
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmeg04147
]
TYM08_P2139
Enzymes [BR:
mmeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
TYM08_P2139
Messenger RNA biogenesis [BR:
mmeg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
TYM08_P2139
Chaperones and folding catalysts [BR:
mmeg03110
]
Heat shock proteins
HSP60 / Chaperonin
TYM08_P2139
Mitochondrial biogenesis [BR:
mmeg03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
TYM08_P2139
Exosome [BR:
mmeg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
TYM08_P2139
Exosomal proteins of other body fluids (saliva and urine)
TYM08_P2139
Exosomal proteins of breast cancer cells
TYM08_P2139
Exosomal proteins of colorectal cancer cells
TYM08_P2139
Exosomal proteins of bladder cancer cells
TYM08_P2139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
MGAT2
Motif
Other DBs
NCBI-ProteinID:
BCE02076
LinkDB
All DBs
Position
complement(2538661..2540301)
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKDVLFGDSARAKMARGVNLLADAVKVTLGPKGRNVVLDKSFGAPTVTKDGVSVANEI
ELKDKFENMGAQMVKEVASQANDNAGDGTTTATVLAQAFVNEGLKSVAAGMNPMDLKRGI
DAAVSDVVKQLQALAQPCTDTKAIAQVATISANSDTSVGNIIAEAMEKVGKEGVITVEEG
SGFEDELEIVEGMEFDRGYLSPYFINNQETMSADMENPLVLLVDKKISQIRELVPVLEAV
AKAGRPLLIIAEDVDGEALATLVVNNMRGVVKVCAVKAPGFGDRRKAMLQDIAILTGATV
ISEEIGMSLETATIENLGSAKRATLTKETTTIVDGAGVAENIQARVSQIQTEIAQSESEY
DQEKLQERVAKLAGGVAVIKIGAATEVEMKEKKARVDDALNATRAAVEEGVLPGGGVALV
RAAAGVTAKGANEDQDVGIALTLRALEAPLRQIVSNAGGEPAVVVDKVKAGTANYGYNAG
NDTYVDMIEEGILDPAKVTRSALQAAASVAGLMITTEVMITELTDESDANNAGTNGMDMP
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaaaagacgtattatttggtgatagcgcacgcgcaaagatggctcgtggtgta
aatttattagccgatgcagttaaagtaacattagggccaaaaggtcgtaatgtagtatta
gataaatcttttggtgcaccaacagtgacaaaagatggtgtatctgtagcaaatgaaatc
gaattaaaagataaattcgaaaacatgggtgcgcaaatggttaaagaagtggcatcacaa
gcaaatgataatgcgggtgatggtacaacaacagcaacagttttggctcaagcatttgta
aatgaaggtttaaaatccgttgctgctggcatgaatccaatggatttaaagcgcggtatt
gatgcagcggttagtgatgttgtgaaacaattacaagcattagctcagccttgtactgat
actaaagcgattgctcaagtagctacaatctctgctaactctgatacttctgtaggtaac
atcattgcagaagctatggaaaaagtgggtaaagaaggggtgatcacagttgaagaaggt
tcaggttttgaagatgagctagaaatcgttgaaggtatggaatttgatcgcggatatttg
tccccatatttcattaataatcaagaaacgatgtcagcggatatggaaaacccattagta
ttactcgttgataaaaaaatctctcaaattcgcgaattagtgcctgtattagaagcagtg
gctaaagcgggtcgtccattgctgattatcgctgaagatgtagatggtgaagccttagct
acattggttgtgaataatatgcgcggcgttgtaaaggtatgtgctgtcaaggcgcctggt
tttggtgatcgtcgtaaagcaatgctacaagatatcgcaattttaacaggtgcaactgta
atttctgaagagattggtatgtctttagaaacagcaaccattgaaaatttaggttctgct
aagcgtgcaactttaacaaaagaaacaacaacgattgttgatggtgcgggtgttgctgaa
aatattcaagctcgtgtttctcaaatccaaactgaaatcgctcaatcagaatccgagtat
gatcaagagaaattacaagagcgcgttgcaaaattagcaggtggcgtggcagtaattaaa
attggggcagcgacagaagttgaaatgaaagagaaaaaagcccgtgttgatgatgcttta
aatgcgacacgagcagcagtagaagagggtgtattaccaggtggtggtgttgcgttagtt
agagcagcagctggcgtgactgctaaaggcgctaacgaagatcaagatgtaggtattgct
ttaacgttacgagctttggaggcaccgttgcgtcaaatcgtatcaaatgctggtggcgag
cctgcggttgttgttgataaagtgaaagcaggtactgcaaactatggttataatgcaggt
aatgacacatacgtggatatgattgaagagggtattttggatcctgcaaaagtaacacgt
tcggcattacaagcggctgcttcggttgctggtttgatgattactacagaagttatgatt
actgagttaactgatgagagtgatgctaataatgcgggtacaaatggtatggatatgcct
ggtatgggcggaatgatgtaa
DBGET
integrated database retrieval system
