Marinicellulosiphila megalodicopiae: TYM08_P2519
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Entry
TYM08_P2519 CDS
T10978
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
mmeg Marinicellulosiphila megalodicopiae
Pathway
mmeg02020
Two-component system
mmeg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mmeg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TYM08_P2519
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
TYM08_P2519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmeg03021
]
TYM08_P2519
Transcription machinery [BR:
mmeg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TYM08_P2519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
BCE02456
LinkDB
All DBs
Position
2977440..2978942
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AA seq
500 aa
AA seq
DB search
MKTSLQLKMGQHLTMTPQLQQAIRLLQLSTLDLQQEIQQVLESNPMLEVNDEEPSANNNE
QDQNSQKSAENEISEPNKIEETDSQWEENIPDELAVDTSWDDIYPNLPTNMSAPSGDDIN
FDSFRSETEDLQDHLFWQLNLTPMNTRDRIIAESIIESCGNDGYLKSTIEEIFSGLSNEL
NEEGMNEEQMLELDELEAVLHRVQQFDPPGVCAIDLSDCLTIQLKQLPLQTEYLEQAKLI
VKDFLPQLGSRDYQNILRKTKFKDTELQSILVLIQSLNPRPGDSISEDQAQYVVPDVFVR
KDIENNKWLVELNPDIAPKLHINSGYAELIKRNDASSDNDYLKTNLSDAKWFIKSLHSRN
ETLLKVATKIVEHQRGFLDYGEEAMKPLVLHDIALDVDMHESTISRVTTQKYMHTPRGIF
ELKYFFSSHVSTANGGECSSTAIRAMIKKIISEENTKKPYSDSKLATLLDQQGIKVARRT
IAKYREAMHIPPSNERKSLM
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacttcacttcaattaaaaatgggccagcatcttacgatgactccccagcttcaa
caagccatccgtttattacaactttccacgctcgatttgcaacaagagatccaacaagta
cttgaatccaatccaatgcttgaagtaaatgacgaagagccttctgcaaataacaatgaa
caagatcaaaattcacaaaaaagtgctgaaaatgaaatatccgaacccaataaaatagaa
gaaacagattcacaatgggaagaaaatatccctgacgaattagcggttgatacttcatgg
gacgatatttatccaaatctacccacaaatatgtcagcaccttctggtgacgatattaat
tttgatagctttcgaagtgaaactgaggatttacaagatcacttattttggcaattaaac
ttaaccccgatgaatactcgtgatcgaatcattgctgaatcgataattgaatcctgtgga
aatgacggatatttaaaatccacaattgaagaaattttctcaggcctttcaaatgaatta
aatgaagaaggtatgaatgaagaacaaatgcttgaattagatgaactagaagccgttctt
catagggtgcaacaattcgatccacctggtgtgtgcgccatagatttaagtgactgccta
acaattcaactaaagcaactgcctcttcaaacagaatatttagaacaagcgaaattgatt
gttaaagacttccttcctcaattaggttctcgtgattatcaaaacatcttacgtaaaaca
aaatttaaagatactgagttgcaatctattttagtactcatacaatcgcttaaccctcgc
ccaggggacagtatttccgaagaccaagcccaatatgttgttccagatgtatttgttcgt
aaagatatcgaaaacaataaatggctagtagaattaaatccagatatcgcgccaaaatta
cacattaatagtgggtatgctgagttaatcaaacgtaatgatgcttcaagtgataatgat
tatttaaaaacaaatttaagtgatgccaagtggtttattaaatctttacatagcagaaat
gaaacgttacttaaagtagcaacaaaaattgttgaacatcaacgtggatttctagattat
ggcgaagaagctatgaaaccattggtattgcatgatatcgcacttgatgtcgacatgcat
gaatccaccatttcaagggttactactcaaaaatacatgcacaccccaagaggtattttt
gaattgaaatatttcttctctagccatgtttccactgcaaatggcggagagtgcagttca
acggcgattcgagcaatgattaaaaaaataatcagcgaagaaaacacaaaaaaaccttat
agtgatagcaaattagcaacattattagatcagcagggaattaaagttgcacgaagaacc
attgcaaagtatcgtgaagcgatgcatattccaccttcaaatgaacgaaaaagtttaatg
taa
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