Marinicellulosiphila megalodicopiae: TYM08_P2542
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Entry
TYM08_P2542 CDS
T10978
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
mmeg Marinicellulosiphila megalodicopiae
Pathway
mmeg00550
Peptidoglycan biosynthesis
mmeg01100
Metabolic pathways
mmeg01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
mmeg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TYM08_P2542
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
TYM08_P2542
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mmeg01011
]
TYM08_P2542
Enzymes [BR:
mmeg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
TYM08_P2542
Peptidoglycan biosynthesis and degradation proteins [BR:
mmeg01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
TYM08_P2542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
BCE02479
LinkDB
All DBs
Position
complement(3005983..3008094)
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AA seq
703 aa
AA seq
DB search
MNQPSFTSKNQPDRRAVRNRVLLMVLLTFILCVVLVMRMSNLQLRDYERFSTRSEDNRIH
SCPISPTRGVIYDNKGKILAGNVTSYNLVVLRHQVKDYDALFEQVRQYVTLSDDELNYFI
RSRRTVDRCDHVILKSRLSDEEIAILSANRPFLEGVEIEASLIRDYPLIEEFSHSVGYIG
SINERDQEFIVEQYAKQKGVLNNDNSNNSLNDILKSPIIDVKRLALQEYAGTNIIGKVGI
EKQYEKVLLGQPGISIAETNYRGKLIRELDRIQPVPGKDLHLFLDSHVQHIALNELENSR
LKIEQQANTQERERFKNDPSIALREIHVPTIRGSIVAIDVQTGGIVAMISNPSFDPNPFV
TGYGVAAYNELNTSVDKPFLNRSINGKYAPASTIKPFIGLGAVDTNVVSWTDKYHSTGVY
SLENASDKRDWKKGGHGKIDLRQAIIESVNTYFYDTAFRMTVEPIHDTLENFGLGQVTAF
DIYGDNSGLNPSREWKKSRYNESWYAGDTVNLAIGQGYFQVTPMQMAIATAVMARKGKWF
TPRLVDYIVDNKGNVEVVNPPAPREDYVLNDPTNWDKMHEAMEQVIYNPKGTAKIVNTPD
LKYRIAGKTGTGQNVSLSEDVDYSDTAVASRTRDNAWFISFAPSDNPKLAIAIILENADH
GGSVAAPIARKMFDAYLLDEKGQLKDFSILEIDSTVNEELNNE
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaccatcttttacttcaaaaaaccaaccggatcgacgcgctgtgcgtaatcgt
gttttattaatggttttgctaacttttattttgtgtgtcgttcttgtgatgcgaatgtct
aatttgcaattacgtgattatgagcgattttctacacgctcagaagataatcgaatccac
tcctgtccaatctcgccaactaggggggtcatttacgacaataaaggaaagatattagct
ggaaatgtgaccagttataatttggttgtattacgtcatcaagttaaagattatgacgca
ctttttgaacaagttaggcaatacgtgacacttagtgacgatgaattaaattattttatt
cgaagtcgtagaacagtggatcgatgtgatcatgttattttaaaatctcgcttaagtgat
gaagaaattgctattttaagtgcaaatcgaccatttttagaaggggttgaaattgaggcc
agtttgatacgtgattatcctctaattgaggagttttctcacagcgttggttatataggt
tcaattaatgaacgcgatcaagaatttattgttgagcaatacgccaagcaaaaaggtgtg
ttaaataatgataatagtaataattcactaaatgatattttaaaaagtccgattattgat
gtgaaacggcttgcattacaggaatacgcaggcaccaatattattggaaaagtagggatc
gaaaaacagtatgaaaaagtattgttaggccagccaggaataagcattgcagaaacaaat
tatagaggaaaattgatcagggagcttgatcgtattcaacctgtgccgggtaaagattta
catttatttttagacagtcatgttcagcatattgcattaaacgaacttgaaaattctcgt
ttaaaaatcgagcaacaagcaaatactcaagagcgagaacgttttaaaaatgatccttct
attgcattaagagaaattcacgtaccaacaattcgcgggtctattgttgctatagatgtc
caaacaggtggcatagttgccatgatttctaatcctagttttgaccctaacccttttgta
acagggtatggtgttgctgcatataatgaattgaatacttctgtggataagcctttttta
aatcgtagtataaatgggaagtatgctccagcatccacaattaaaccgttcattggtttg
ggagctgtggatactaatgttgtaagctggacagacaaatatcattctacaggggtttat
agtcttgaaaatgccagtgataaacgagactggaaaaaaggaggacacggtaaaattgat
ttacgtcaagcaatcattgaatcggtgaatacttatttttacgacactgcatttcgaatg
acggttgaaccgatacatgacactttagaaaattttggcctaggtcaagttaccgctttt
gatatttatggtgacaattcaggattgaatccatcacgagaatggaaaaaatcccgatat
aatgaaagttggtatgcaggggatacagtgaatttagcaattggccagggttattttcag
gtgacaccaatgcaaatggcaattgcaacagcagtaatggcaagaaaaggtaaatggttt
actcctcgattggtggattatatagtggacaataaaggtaatgttgaagttgtgaatcca
ccagcacctagagaagattatgtgttaaatgatcctacgaattgggacaaaatgcatgag
gcaatggagcaagtgatttacaacccaaaaggaaccgcaaaaattgtaaatactcctgat
ttgaaatataggattgccggtaaaactggaaccggacaaaatgtttcgttaagtgaagat
gtcgattatagtgatactgcagtagcttcaagaactcgagataacgcttggttcattagc
tttgccccatctgataatcctaagttagccatcgcgattattcttgaaaatgcggatcac
ggtggttcagtggccgcaccaattgcgcgaaaaatgtttgatgcctacttattagatgaa
aaaggacagttaaaagatttttctatactcgaaatagattcaactgtgaacgaggagtta
aataatgaataa
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