Marinicellulosiphila megalodicopiae: TYM08_P2769
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Entry
TYM08_P2769 CDS
T10978
Name
(GenBank) holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
mmeg Marinicellulosiphila megalodicopiae
Pathway
mmeg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TYM08_P2769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmeg03400
]
TYM08_P2769
Enzymes [BR:
mmeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TYM08_P2769
DNA repair and recombination proteins [BR:
mmeg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TYM08_P2769
RecFOR pathway proteins
TYM08_P2769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
Mg_chelatase
AAA_3
AAA_14
nSTAND3
Rad17
Sigma54_activ_2
RNA_helicase
AAA_16
TIP49
AAA_17
ABC_tran
AAA_2
AAA_18
AAA_28
NTPase_1
Parvo_NS1
Resolvase
TsaE
NB-ARC
RsgA_GTPase
AAA_24
Motif
Other DBs
NCBI-ProteinID:
BCE02706
LinkDB
All DBs
Position
complement(3268195..3269196)
Genome browser
AA seq
333 aa
AA seq
DB search
MIEEDRFIAPQHVSQPEINHDRAIRPISLAEYIGQPIVKEQMSIFLAAAKKRNEPIDHTL
IFGPPGLGKTTLANIIANEMGVSVKTTSGPVLEKAGDLAAMLTNLEAGDVLFIDEIHRLS
PNIEEVLYPAMEDYQLDIMIGEGPSARSIKLELPPFTLVGATTRAGRLTSPLRDRFGIVQ
RLEFYNVKDLTSIVLRSAKKLGVQIDDEGAYEIAKRSRGTPRIANRLLRRVRDYADIKSE
GIVDSQIADLALNMLNVDKLGFDHLDRKLIQAMKERFDGGPVGLDNLAASISEDKETIED
VIEPYLIQQGFIARTPRGRVLTDLANELCVNNE
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagaagatcgttttattgccccacaacatgtctctcagcctgaaattaatcat
gatcgtgctattcgtccaatatcgttagcagaatatatcgggcaacccattgttaaagag
caaatgtcgatatttttggcagcggctaaaaaacgaaatgagccaattgatcatacttta
atattcggacctccaggcttaggcaagaccactttagctaatattattgccaatgaaatg
ggtgtctcggtcaaaaccacgtcaggacctgtgctagaaaaagcaggagatttagcagca
atgctcactaatttagaggcaggtgatgttttatttattgatgaaatacatcgattaagc
ccaaatattgaagaggttttgtatccagcaatggaagattaccagttagatattatgatt
ggtgaaggcccctctgcaagatcaatcaaacttgaattgcccccttttactttagttggc
gcaaccacaagagcagggcgtttaacttcccctcttcgtgatcggtttgggattgtgcag
cgtttagagttttataatgtaaaagatctgacttcaattgtgttgcgctcagcaaaaaaa
ttaggagttcaaattgatgacgaaggggcttatgaaattgcgaaacgctctcgtggtaca
ccaagaattgcaaaccgtttattacgtcgcgtgcgtgattatgccgatattaaaagcgaa
ggtattgtagacagtcaaatagccgatttagcgttaaatatgttaaatgtggataagtta
ggtttcgatcatcttgatcgaaaactaatacaagccatgaaagagcgatttgacggaggc
cctgttggtttggataatttagcagcttcgatcagtgaagataaagaaaccattgaggat
gtgatagagccttatttgattcagcaaggttttatcgccagaaccccaaggggacgagtg
ttaacagatttggcaaatgaattgtgtgtgaataatgaataa
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