Marinicellulosiphila megalodicopiae: TYM08_P2963
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Entry
TYM08_P2963 CDS
T10978
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
mmeg Marinicellulosiphila megalodicopiae
Brite
KEGG Orthology (KO) [BR:
mmeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmeg03032
]
TYM08_P2963
03400 DNA repair and recombination proteins [BR:
mmeg03400
]
TYM08_P2963
Enzymes [BR:
mmeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
TYM08_P2963
DNA replication proteins [BR:
mmeg03032
]
Prokaryotic type
DNA Topoisomerases
TYM08_P2963
DNA repair and recombination proteins [BR:
mmeg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TYM08_P2963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SIS
BfiI_DBD
Motif
Other DBs
NCBI-ProteinID:
BCE02900
LinkDB
All DBs
Position
complement(3545733..3548423)
Genome browser
AA seq
896 aa
AA seq
DB search
MSDHSSVQPINIEEELKKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSVLGNDWNK
PYKKSARVVGDVIGKYHPHGDSAVYETIVRMAQNFSMRYMLVDGQGNFGSVDGDSAAAMR
YTEIRMDKIAHSILADLEKETVDYVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMATN
IPPHNLNEVISGCLAYIENEDITIDELMEHIPGPDFPTAAFINGRKGILDAYRTGRGKIY
MRARAEFETSKTGRESIIITQIPYQVNKARLIEKIAELVKDKKVEGISELRDESDKDGMR
IAIDVKRGEAGDVILNNLYSQTQLETVFGINTVALVDGQPKTLNLKELISAFVRHRREVV
TRRTVFELRKARARGHILEGLAVALSNIDPMIELIKASKTGAEARDKIVEREWALGDVAG
MLERAGADACRPEDLEEQYGIRDEKYHLSPVQAQQILDMKLQKLTGLEHEKLMSEYRQII
EDISEYLRILGSVERLMEVITEELVDVREQFGDERRTEIIASRLDLSNLDLITEEDMVVT
ISHGGYAKSQQLDVYQAQRRGGKGKAATQVKDEDFVEHLLIASTHDTILCFTSAGKVYWL
KVFDIPQAGRNAKGRPIINLLPLAEGERITAILPIREYEEGKFIFMATQNGTVKKTSLTS
FARQRTSGLIALTLEEGDNLVGVAVTDGTKDIMLFADNGKAVRFNENDVREMGRTARGVR
GIRLADEEKLLSLIIPAEDGTVLTASENGYGKRTDISDYPAKGRGGKGVICMVQNERNGK
LIGAAQIFAGDEIMMISDQGTLVRTRGNEISVQGRNTQGVRLIRLTKEEKLIGLERVAEP
AEVEEIVDGEIVEGAVVENVVEGVAVEGAVEGEATETKTDSTPKQDTQEDEGDADE
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcattcctccgttcagccaattaatattgaagaagaattaaaaaaatcctat
ttagattacgccatgagtgtaattgttggacgtgcattacctgatgtacgtgacggttta
aaaccggttcaccgtcgtgtgttatttgcaatgagtgtattaggtaacgactggaacaaa
ccttataaaaaatcggcacgtgttgtcggtgatgtaatcggtaaatatcacccacatggt
gatagcgcagtttatgaaacaatcgtacgcatggcgcaaaatttctcgatgcgttatatg
ttagtagatggtcaaggtaactttggttcggttgatggtgattcagcggcggcaatgcgt
tatacggaaattcgtatggacaaaattgctcactcaattttagccgatttggaaaaagag
accgtagattatgtgccgaactacgacggcactgaacaaattcctgatgtcatgccaaca
cgtattcctaacctgttagtgaatggatcctccggtattgctgttggtatggctacaaac
attcctccgcataacttaaatgaagttatttctggctgtcttgcttatattgaaaacgaa
gacatcactattgatgaattaatggaacatattccagggcccgattttccaacggctgca
tttattaatggccgtaaaggtattttggacgcttatcgtacagggcgtggcaaaatttac
atgcgcgctcgtgccgagtttgaaacaagtaaaaccggtcgtgagtcgatcattattacg
cagattccttaccaagtgaacaaagcaagattgatcgaaaaaattgctgagttggttaaa
gacaaaaaagtagaaggcatttctgaattacgtgacgagtctgataaagacggtatgcgt
attgccattgatgtgaaacgtggcgaagccggcgacgttattttaaataatttatattct
caaactcaactagaaaccgtatttggtattaataccgttgcattagttgatggacagcca
aaaacattaaacttaaaagaattaatttcagcgtttgttcgccatcgtcgtgaagtagtt
acacgtcgtactgtgtttgaattacgcaaagcgcgcgcacgtggtcatattttagaaggt
ttggctgttgcgttatctaatattgatccaatgattgaattgattaaagcatctaaaacc
ggtgctgaagcgcgcgataaaattgttgaacgtgaatgggcgttaggtgatgtagcaggc
atgttagaacgtgctggtgcagatgcgtgccgtccagaagacttagaagaacagtacggt
attcgtgatgaaaaatatcatttatcaccggtacaagcacagcaaattctagacatgaaa
ttgcaaaaattaaccggtctagaacacgaaaaattaatgagtgagtatcgtcaaattatt
gaagatatttcagaataccttcgtatattaggttccgttgagcgtttgatggaagtaatt
acagaagagttagttgatgttcgtgaacaatttggtgatgaacgtcgtacagaaattatt
gcctctcgtttagatttatcaaacttagatttaattaccgaagaagatatggtcgtgact
atttctcacggcggttatgcaaaatctcaacaattagatgtttaccaagcacagcgtcgt
ggtggtaaaggtaaagcggctactcaagttaaagatgaagattttgttgaacatctatta
attgcaagtacccacgatacgattttatgtttcacctctgcaggtaaagtgtattggtta
aaagtgtttgatattcctcaagctggtcgtaacgcaaaaggtcgcccaattattaattta
ctaccattggcagaaggcgaacgcattaccgctattttacccattcgtgaatacgaagaa
ggtaaatttattttcatggcaacgcaaaacgggacagttaagaaaacatctttaacttct
tttgctcgccaacgtacttctggtttgattgcattaacattagaagaaggtgataactta
gtaggcgttgcggtaacagacggcactaaagatattatgttgtttgctgataacggcaaa
gcggttcgctttaatgaaaacgacgttcgtgaaatgggtcgaacggctcgtggtgttcgt
ggtattcgtttagccgatgaagaaaaattattaagtctaattattccagctgaagatggt
actgtattaactgcatctgaaaacggttacggaaaacgtaccgatatttctgattaccct
gcaaaaggtcgtggcggtaaaggtgttatttgtatggttcaaaatgagcgtaacggtaaa
ctaattggtgcggcacaaatctttgcgggtgatgagattatgatgatttctgatcaagga
acattggttagaacgcgtggtaacgagatttcagttcaaggccgtaacactcagggcgtg
agattaattcgtttaacaaaagaagaaaagttaatcggattagagcgtgttgctgaacca
gctgaggttgaagaaattgttgatggtgaaattgttgaaggtgctgtagttgagaatgta
gttgaaggtgtagctgtcgaaggtgcggtcgaaggcgaagcaacagaaactaaaacagat
tcaactccaaagcaagacactcaagaagatgaaggtgatgccgatgagtga
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