Marinicellulosiphila megalodicopiae: TYM08_P3421
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Entry
TYM08_P3421 CDS
T10978
Name
(GenBank) DNA repair protein RadA/Sms
KO
K04485
DNA repair protein RadA/Sms
Organism
mmeg Marinicellulosiphila megalodicopiae
Brite
KEGG Orthology (KO) [BR:
mmeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmeg03400
]
TYM08_P3421
DNA repair and recombination proteins [BR:
mmeg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TYM08_P3421
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
RecA
GvpD_P-loop
DnaB_C
AAA_16
SLFN-g3_helicase
AAA_22
ABC_tran
AAA_24
Rad51
AAA
NTPase_1
nSTAND3
DUF7125
AAA_29
Zeta_toxin
AAA_14
PAXNEB
cobW
AAA_5
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
BCE03358
LinkDB
All DBs
Position
complement(4052552..4053934)
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AA seq
460 aa
AA seq
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MAKAKVKTQFVCTECGSDYSKWQGQCSSCKAWDSLKEFKESAGTASRHANFNGFSGQVAD
VQTLGEVNLADQPRFSSGSSEFDRVLGGGVVPGSAVLIGGEPGAGKSTLLLQTLCRLAQT
HSALYVTGEESLQQVAMRANRLGLPVDKLKIASETNVQEICNLATSLKPAILVVDSIQVV
HSPEIESAPGSVSQVRESAAYLTRFAKQTGTVLFLVGHVTKDGSLAGPKVLEHMIDCSIM
LEGTADSRFRTLRGIKNRFGAVNELGVFAMLDSGLKEVKNPSSIFLNKQSDETPGSVVTT
IWEGTRPMLIELQALVDDAHSPNPKRVVVGWDHQRLSMLLAILNRHCGVFTGDQDVYLNV
VGGVKINETSADLASLVAVLSSLRNKPVSSQLIVLGELGLSGEVRPVVSGEQRIREAAKH
GFTRAIVPKANAPKKTISGIKVIAVDKLQQALDAVWDETY
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagcaaaagtaaaaactcaatttgtctgcaccgaatgcggtagtgattattca
aaatggcaaggtcagtgttcaagttgcaaagcttgggattcccttaaggaatttaaagaa
tcagctggaacagcctctcgccatgcaaattttaatggattttcaggtcaagttgctgat
gtacaaacccttggtgaagtaaacttggcagatcaaccgcgtttttcaagtggtagttct
gaatttgatcgtgtgcttggtggcggtgtagtgcctggatcggctgttttaattggtggt
gaacctggtgcaggtaaatcaacgttacttttacaaacattgtgtcgactagctcaaact
catagcgcgttatatgtaaccggagaagaatctttacaacaggttgccatgcgtgcaaat
cgcttagggttacctgttgataaattaaaaattgcttctgaaaccaatgtgcaagaaatt
tgtaatttagctacttccttgaaacctgctattttggttgtggattccattcaagttgtg
cattcacctgaaattgaaagtgcacctggatctgtttcgcaagtaagagaatctgcagcg
tacctcactcgttttgcaaaacaaacgggtacggttttatttttagttgggcatgtgaca
aaagatggatcacttgcaggtcctaaagtgttagagcacatgattgattgctcgattatg
cttgaaggcaccgcagattcacgttttagaaccttaagggggatcaaaaatcgttttggg
gcggtgaatgaattgggggtgtttgccatgctcgattccggtttaaaagaagtaaaaaac
ccttcttcaatttttttaaataagcaaagtgatgaaacaccaggctcagttgtgactaca
atctgggaaggcacaaggccgatgttgatcgaactgcaggcgttggttgatgatgcgcat
tcgccaaatcctaagcgtgtagtggtgggttgggatcatcagcgtttgtctatgctgctt
gccattttaaatcggcactgtggcgtgtttacaggtgatcaggatgtatatttgaatgta
gttggaggtgtgaaaataaatgaaaccagtgccgacttagcttcattagtcgctgtgctt
tctagtttgcgaaataagccggtttcatctcaattgattgtattgggggagttggggtta
agtggggaggtgcgtcctgttgtaagtggcgagcaaagaattcgtgaggctgctaaacat
ggatttactcgagcaattgttcccaaagccaatgcgcctaaaaaaacaatcagtgggatc
aaagtgatagcagtggataaattacagcaagctttagatgcagtttgggatgaaacttat
tga
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