Marinicellulosiphila megalodicopiae: TYM08_P3637
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Entry
TYM08_P3637 CDS
T10978
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mmeg Marinicellulosiphila megalodicopiae
Pathway
mmeg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mmeg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TYM08_P3637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmeg03021
]
TYM08_P3637
03400 DNA repair and recombination proteins [BR:
mmeg03400
]
TYM08_P3637
Enzymes [BR:
mmeg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TYM08_P3637
Transcription machinery [BR:
mmeg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TYM08_P3637
DNA repair and recombination proteins [BR:
mmeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TYM08_P3637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
BCE03574
LinkDB
All DBs
Position
complement(4324627..4325628)
Genome browser
AA seq
333 aa
AA seq
DB search
MQRSANEFLTPKNIDVQELSSTRAKVTLEPLERGFGHTLGSALRRILLSSLPGAAISEVE
IEGVLHEYSVLEGVQEDVLNILLNLKGVAIRLFDREEATLTLSKSGSGVITAADIQLDHG
VEITNPDHVIATLGASGSLNMTLHITMGRGYVPASSRQTGDEESKAIGKLQLDASYSPVL
RVAYVVDNARVEQRTDLDKLILDLETNGTVEPEEAIRRASTILQQQLAAFVDLDNEVEAE
PVVEEDLIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASKGLSLGMVLENWPPASLRSDDKVLV
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgatcagcaaacgaatttttaactcctaagaacattgatgttcaggagcttagc
tcaacaagagctaaagtaacgttagaacccttagagcgtggttttggccatactttgggt
tctgcgctacgtcgcattcttctttcttcattgccgggtgccgcgatttcagaagttgaa
attgaaggtgtcttgcacgaatacagcgtacttgaaggggttcaagaagatgttttaaat
atcttattaaaccttaaaggcgtagcgattcgtttgtttgatcgcgaagaagcaacgtta
acattaagtaagtcaggttctggcgtaattactgctgctgatatccaattggatcatggc
gtagaaattaccaaccctgaccacgttatcgcgacgttaggtgcaagcggttcattgaat
atgactcttcatatcacaatgggtcgtggttatgttccagcaagcagtcgtcaaactggc
gatgaagagagtaaagccattggtaaacttcagctggatgcttcttatagcccagtgttg
cgagttgcttatgtagtggataatgctcgtgttgaacagcgtactgatcttgataaatta
atcttagatcttgaaactaatggtactgtagaaccagaagaggcgattcgtcgtgcttca
actattttacaacagcaattagctgcatttgtcgatttagacaatgaagtggaagctgag
ccagtagttgaagaagatttaattgatccaatattgttgagaccagttgatgatttagag
cttacagttcgttctgcgaactgtttaaaagcagagaatatttattacattggtgatttg
atccaacgtactgaagttgaacttttgaaaactccgaatttaggtaaaaaatcacttact
gaaatcaaagatgttttagcatcgaaaggtttgagcttaggtatggtgctagaaaactgg
ccacctgctagcctaagaagtgatgacaaagttcttgtctaa
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