Candidatus Mycobacterium methanotrophicum: M5I08_00030
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Entry
M5I08_00030 CDS
T08748
Symbol
gyrA
Name
(GenBank) intein-containing DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
mmeh
Candidatus Mycobacterium methanotrophicum
Brite
KEGG Orthology (KO) [BR:
mmeh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmeh03032
]
M5I08_00030 (gyrA)
03400 DNA repair and recombination proteins [BR:
mmeh03400
]
M5I08_00030 (gyrA)
Enzymes [BR:
mmeh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
M5I08_00030 (gyrA)
DNA replication proteins [BR:
mmeh03032
]
Prokaryotic type
DNA Topoisomerases
M5I08_00030 (gyrA)
DNA repair and recombination proteins [BR:
mmeh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
M5I08_00030 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Intein_splicing
SIS
Motif
Other DBs
NCBI-ProteinID:
UQX11036
UniProt:
A0ABY4QKC7
LinkDB
All DBs
Position
6743..9832
Genome browser
AA seq
1029 aa
AA seq
DB search
MTDTTLPPGGDAADRIEPVDIQQEMQRSYIDYAMSVIVGRALPEVRDGLKPVHRRVLYAM
FDSGFRPDRSHAKSARSVAETMGNYHPHGDASIYDTLVRMAQPWSLRYPLVDGQGNFGSP
GNDPPAAMRYCLTGDTLVSLPEGRSVCIGDVVPGARSNSDNAIDLKVLDRHGCPALADRL
FHSGEHRVHTVATDGGFEITGTANHPLLCLVDVGGIPTLLWKLIEEVRPNDFLVRADCAR
FARGSCENSAISCTVEDVPGLARFLNVYGDDPDAPAIVADLTDGRFYYARVASVTDAGVQ
PVYSLRVDSDDHAFITNGFVSHNTEARLTPLAMEMLREIDEETVDFIPNYDGRVQEPAVL
PSRFPNLLANGSGGIAVGMATNIPPHNLRELSEAVFWCLENFDADEEATLAAVMERVKGP
DFPTSGLIVGSQGVSDAYKTGRGSVRMRGVVEVEEDSRGRTGLVITELPYQVNHDNFITS
IAEQVRDGKLAGIANIEDQSSDRVGLRIVVELKRDAVAKVVLNNLYKHTQLQTSFGANML
AIVDGVPRTLRLDQLIRHYVEHQLDVIVRRTTYRLRKANERAHILRGLVKALDALDEVIA
LIRASETVDVARAGLIELLDIDEIQAQAILDMQLRRLAALERQRIIDDLAKIEIEIADLE
DILAKPERQRRIVRDELTELVEKHGDDRRTRIIAADGEVSDEDLITREDVVVTITETGYA
KRTKTDLYRSQKRGGKGVQGAGLKQDDIVGHFFVCSTHDWILFFTTQGRVYRAKAYDLPE
ASRTARGQHVANLLAFQPEERIAQVIQIRSYEDAPYLVLATRNGLVKKTALTDFDSNRSG
GIVAINLRDGDELVGAVLCSAEDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFN
TDDYLLSLNVVREGTFLLVATSGGYAKRTAIEEYTAQGRGGKGILTIQYDTRRGKLVGAL
IVDDDSEVYAITSGGGVIRTAARQVRKAGRQTKGVRLMNLGEGDTLLAIARNAEEAGVAD
DESATGPDA
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccacgctgccgcccggcggtgacgccgccgaccggatcgaaccggtcgac
atccagcaggagatgcagcgcagctacatcgattacgcgatgagcgtcatcgtgggccgc
gcgttgccagaggtgcgcgacggcctcaagccggtgcaccgccgggtgctctacgcgatg
ttcgactccgggttccgcccggaccgaagccacgccaagtctgcccgctcggtggccgag
acgatgggtaactaccacccgcacggcgacgcctcgatctacgacaccctggtgcggatg
gcccagccgtggtcgctgcgctacccgctggtcgacggtcagggcaacttcggctcaccg
ggcaacgacccaccggccgcgatgagatattgcctcaccggcgacacgctggtctcgctg
cccgaagggcggtcggtgtgcatcggcgatgtggttcccggcgctcggtctaacagcgac
aacgccatcgatctcaaagtgcttgaccggcatggttgtcccgccttggcggaccggctg
ttccactccggcgagcatcgcgtgcacaccgtggccaccgacgggggcttcgagatcacg
ggtacggcaaatcacccactgctctgtctagtcgacgttggcggcataccgacgctgctg
tggaagctgatcgaagaagtccgccccaacgactttctcgtccgcgccgactgtgcacgt
tttgcacgcggaagctgcgaaaactcagcgataagctgcacagtcgaggacgtcccgggg
ctggcgcgcttcctgaacgtctatggcgacgaccctgatgcgccagccatcgtcgccgac
ttgaccgacggccggttctactacgcgcgcgtagcctccgtgaccgatgccggggtgcaa
cctgtgtacagcttgcgggtcgacagcgacgaccacgcattcatcacaaacggtttcgtc
agccacaacaccgaggcgcggttgacgccgttggcgatggagatgctgcgcgaaattgac
gaggagacagtcgatttcatccctaactatgacggccgggtgcaggaaccggcggttctg
ccgagccggttccccaacctgctggccaacgggtcgggcggcatcgcggtgggcatggcg
accaacatcccgccgcacaacctgcgggagctttccgaagcggtgttctggtgcctggag
aacttcgacgccgacgaagaggcgacgctggccgcggtgatggagcgggtcaagggcccg
gacttccccacctcgggactgatcgtcggaagccaaggcgtatccgatgcgtacaaaacc
ggccgcggatccgtgcggatgcgcggagtcgttgaggtggaggaagattcgcgaggccgg
accggtctggtgattaccgagttgccctatcaggtcaaccacgacaacttcatcacctcg
atcgccgagcaggtccgcgacggcaagctggccgggatcgccaacatcgaagaccagagc
agcgaccgggtcgggctgcgcatcgtcgttgagctcaagcgcgatgccgtggccaaggtg
gtgctgaacaacctctacaagcacacccagttgcagaccagtttcggcgccaacatgctg
gccatcgtcgacggggtgccgcgcaccctgcggctcgaccagctgatccgccactacgtc
gaacaccaactcgacgtcatcgtgcggcgcaccacctaccggctgcgcaaagccaacgaa
cgggcccacatcctgcgcggcctggtcaaggcactcgatgcgctcgacgaggtgatcgcg
ctgatccgggcgtcggagacggtggacgtcgcccgggccggcctgatcgagctgcttgac
atcgacgagatccaggcgcaggccatcctggacatgcagttgcgccgcctggcggcgctg
gagcgccagcgcatcatcgatgatctcgccaagatcgagatcgagatcgccgacctggaa
gacattttggccaaaccggagcggcagcgccgcatcgtgcgcgacgagctcaccgagctc
gtcgagaagcacggcgatgaccgccgcacccggatcatcgccgccgacggcgaagtcagc
gacgaggatctgatcacgcgcgaagacgtcgtcgtcaccatcaccgaaaccggctacgcc
aagcgcaccaaaaccgacctgtaccgaagccaaaagcgcggtggcaagggcgtgcagggc
gcggggctgaagcaggacgacatcgtggggcacttctttgtgtgctcgacccacgactgg
atcctgttcttcaccacccagggacgggtgtaccgggccaaggcttacgacctgccggaa
gcctcgcggacggcgcgcggacaacatgtcgccaacctgctcgccttccagccagaagag
cggatcgctcaggtgatccagatccgcagctacgaggacgccccctacctggtgctggcg
acccgcaacgggctggtcaaaaagaccgcactgaccgacttcgactcgaaccgctcagga
ggaatcgtcgcgatcaacctgcgcgacggcgacgaactggtcggggcggtgctgtgctcg
gctgaggacgatctactgctggtgtcggccaacggccagtccatccggttctcggcaacc
gatgaggcgctgcggccgatgggccgggcgacctcgggcgtgcagggcatgcggttcaac
acagacgactacctactgtcgctcaacgtggtccgggaaggcacgttcctgctggtcgcg
acgtcgggcggctatgccaagcgcacggcgatcgaggagtacaccgcgcagggccgcggc
gggaaaggcatcttgacgatccagtacgacacccggcgtggcaagctggtaggagcgctg
atcgtcgacgacgacagcgaggtctacgccatcacctccggcggaggggtgatccggacg
gcggccagacaggtccgcaaagccggacgccagaccaaaggcgttcggttgatgaacctg
ggcgagggcgacacactgttagccatcgcgcgcaacgccgaagaggccggcgtcgccgac
gacgaatcggcgaccggacccgacgcgtaa
DBGET
integrated database retrieval system
