Candidatus Mycobacterium methanotrophicum: M5I08_00065
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Entry
M5I08_00065 CDS
T08748
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
mmeh
Candidatus Mycobacterium methanotrophicum
Brite
KEGG Orthology (KO) [BR:
mmeh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmeh03400
]
M5I08_00065
DNA repair and recombination proteins [BR:
mmeh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
M5I08_00065
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
UQX11040
LinkDB
All DBs
Position
13630..14052
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AA seq
140 aa
AA seq
DB search
MVSESWATTPAVRRSMRSNRSRDTRPELALRRLLFAEGLRYRVAARPLPRLKRTVDIVFR
PSRVAVEMRGCFWHGCPQHFRAPASNKEYWTAKIARNKGRDLATEQALRDAGWLLVVVWE
HDNLREAAREIASAVARRRR
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atggtgagcgagtcgtgggcaaccacgcctgcggtcagacgctcgatgcgctcgaaccgc
agtcgcgacacccgtcccgagctcgcgctgcgcaggctccttttcgccgagggactccgc
taccgcgtagcagctcggcccctgcccaggctcaagcgcacggtcgatatcgtctttcgg
cctagccgggtcgcagtggagatgcgtgggtgcttctggcatggctgcccgcagcacttt
cgcgcgcccgccagcaacaaggagtactggacagcgaaaatcgcccgcaataagggacgg
gacctggcgaccgaacaagccttgcgggacgcggggtggctcctagtcgtcgtgtgggag
cacgacaacctaagggaggccgcacgtgaaatcgcgtctgccgtcgcccgccgccggcga
tag
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