Candidatus Mycobacterium methanotrophicum: M5I08_02920
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Entry
M5I08_02920 CDS
T08748
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mmeh
Candidatus Mycobacterium methanotrophicum
Pathway
mmeh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmeh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M5I08_02920 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmeh03400
]
M5I08_02920 (recC)
Enzymes [BR:
mmeh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
M5I08_02920 (recC)
DNA repair and recombination proteins [BR:
mmeh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M5I08_02920 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
CBM_AftD
Motif
Other DBs
NCBI-ProteinID:
UQX11482
LinkDB
All DBs
Position
538971..542252
Genome browser
AA seq
1093 aa
AA seq
DB search
MPLHLHRAERTDLLADRLGAMLADPLPDPFAEELVLVPARGIERWLSQHLSHVLGAANGG
DGVCAGVAFRSPASLIAEITGTVDDDAWSPDAMTWPLLETIDASLDEPWCRTLATHLGHF
EPTDAEAELRRGRRYSVARRLAGLFASYARQRPHLLADWLDGNTAGLDADLAWQPELWRT
LVERVPADPPHIRHHKTVARLREGPTDLPARVSLFGHTRLACTEVELLDALATHHDLHLW
LPHPSDGLWRSLNDTHGAVPRRDDTSRTEAKHPLLETLGRDLRELQRALPASRAADEFLS
GATKPDTLLGWLQADIAANAVRPEGRGRKPDDRSVQVHACHGPARQIDVLREVLLGLLED
DPTLEPRDIVVMCPDIETYAPLIVAGFGLGETAGDSHPAHRLRVRLADRALTHTNPLLGV
AAELLAIAGTRATASQVLNLAQGAPVRARFGFSDDDLDAITGWVRDSNIRWGFDAQHRAT
YGLERVVHNTWRFGVDRILTGVAMSDDSQAWLGTALPLDDVGSNRVELAGRLAEHVERLH
RVVETLSGTKSLTEWLESLSIGIDLLAASDDAWQHAQVRREFADVLAHAGSRASTPLRLP
DVRSLLAGHLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLNVPDGDD
VLARGPMTGERDIRSEDRQLLLDAIGAATETLVITYTGADEHTGHPCPPAVPLAELLDAL
DQTTESPVRGEIVTKHPLQPFDVKNVTPGALVPGKPFTFDPTALAAAESASGKRCEPARF
FTNPLPAPPATDVTLADLLDFFKDPVKGFFRQLDYTLPWDLDTVKDQMPVEIDALDEWSV
GDRMLRDMMRGMDPKVAMNAEWRRGTLPPGKLGWRMAETISRTAAQLVSIAQSHQRTPAH
ARDVAIDVGNGRRVTGTLGRVFDDRLVEVTFSKLAAKHKLQAWISLVALTAGDPSRDWCA
VCVGRGPKDAIEVCSFGKPPDALAVVRDLVGLFDAGHREPLPLPLKTSYAWAERRHKGKD
PVKYARSKWESNNFHQGEDCEPAHARVWGFKAPFEVLLGPVAPGLEMPGEDTRLGALAAR
LWLPALIAEGKPR
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttcatctgcaccgcgccgaacgcaccgacctcctggccgaccggctcggcgcg
atgctggccgacccgctgcccgaccccttcgccgaggaactggtgctggtgccggcgcgc
ggcatcgagcggtggctgagccagcatctctcgcatgtgctgggtgctgccaacggcggc
gacggggtgtgcgccggggtggcgttccgcagcccggcctcgctgatcgccgagatcacc
ggcacggtcgacgacgacgcatggtcgcctgacgcgatgacgtggccgctgctggaaaca
atcgacgcctcactagatgagccgtggtgtcgaacgctggcaacgcatttggggcacttc
gagccgaccgacgcggaggccgagctgcgccggggtcgacggtattcggtggcgcgccgg
ctggcggggctgttcgcgtcgtatgcgcgccagcgtccgcacctgctggccgactggctg
gacggcaataccgccggcctcgacgccgacctggcctggcaaccggagctctggcgaaca
ctggtcgagcgcgtccccgccgatcccccgcatatccgtcaccacaagaccgtcgcccgg
ctgcgtgagggccccaccgacctgccggcacgagtgtcgctgttcgggcacacccgcctg
gcgtgcaccgaggtggagctgctcgacgccctggccacccaccacgacctgcatttgtgg
ctgccgcatcccagcgacggcctgtggcggtcgctgaacgacacgcacggcgccgtgcct
cgacgcgacgacaccagccggacggaggccaagcatccgctgctggaaacgctgggccgc
gacctgcgtgaactgcaacgcgcactaccggccagccgcgccgcagacgaattcttaagc
ggggcaaccaaacccgataccctgctgggctggctgcaagcggacatcgccgccaacgcg
gtcagacccgagggccgcgggcgcaagcccgacgaccgctccgtgcaggtgcacgcctgt
cacggcccggcccgccagatcgacgtgctccgcgaggtgctgctcggcctgctcgaagac
gacccgacgctggagccgcgcgacatcgtggtgatgtgccccgacatcgagacctacgcg
ccgctgatcgtcgcgggcttcgggctcggtgagaccgcgggcgacagccacccggcacac
cgcttgagagtcaggctcgccgatcgcgcgctgacccacaccaaccctctgctcggggtg
gccgccgaactgctcgcgatcgccggaacgagagccaccgccagccaagtgctcaacctg
gcgcagggggcgccggtgcgcgcccggttcggtttcagcgacgacgatctcgatgcgatc
accggctgggtacgcgactcgaacattcggtgggggttcgacgcgcagcaccgcgcgacc
tacgggctcgaacgcgtcgtccacaacacctggcggttcggcgtcgaccgcatcctgacc
ggcgtggcgatgtctgacgactcgcaggcctggctcggcaccgcgctgcccctcgacgac
gtcggcagcaaccgggtcgagctggccgggcggctggccgaacacgtcgaacggctacac
cgcgtcgtcgaaacgctcagcggcacgaagtctttaacggagtggctggagtcgttgagc
atcggaatcgacctcctggccgcttcggacgacgcctggcaacacgcacaggtgcgccgg
gaattcgccgatgtgctcgcgcacgcgggttcgcgggcttcgacgccgctgcggctgccc
gacgttcgctcgctgttggccggtcatctggcagggcggccgacccgggccaactttcgt
accggcacgctgaccgtgtgcacgatggtgccgatgcgctcggtgccgcaccgggtcgtc
tgcctggtcggactcgacgacggagtgttcccgcggctcaatgttcccgacggcgacgac
gtgctggcgcgcgggccgatgaccggtgagcgtgacatccgctcggaggaccggcaattg
ctgctcgacgcgatcggcgcggccaccgagaccctggtcatcacgtacaccggcgctgac
gagcacaccgggcacccgtgtccgcccgcggtgccactggccgagctgctcgatgcgctg
gaccagacgacggaatcgccagtgcgcggggagatcgtgacgaagcacccgctgcagccg
ttcgacgtcaagaacgtgacacccggtgcactggtgcccggcaagccgttcaccttcgac
cccaccgccctggccgccgccgagtccgctagcgggaaacgctgtgagcctgcaaggttt
ttcaccaatccgctgcccgctccacctgccactgacgtcacgctggccgatctgctcgac
ttcttcaaagacccggtcaaaggcttcttccgccagctcgactacacgctgccatgggac
ctcgacaccgtcaaagaccagatgccggtcgagatcgacgcgctcgacgagtggtccgtc
ggcgaccggatgctgcgcgacatgatgcgcggcatggaccccaaggtggcgatgaacgcc
gaatggcgccgcggcacactgccgcccggaaagctcggctggcgcatggccgagacgatc
agccgaacagccgcccaactcgtgagcatcgcccaaagccatcagcggacgcccgcacat
gcccgtgacgtcgccatcgacgtcggtaatggccgtcgcgtgaccggcaccctgggtcgc
gtgttcgatgatcgcctcgtcgaggtgaccttctccaagctggccgccaaacacaaactc
caggcatggatctcattggttgcgctcacggccggcgatcctagtcgcgactggtgcgcg
gtctgcgtcgggcgcggccccaaagacgccatcgaggtctgctcattcggtaagccgccc
gacgcgctggccgttgtgcgtgacctggtcgggcttttcgacgccgggcaccgcgagccg
ctgccgctgccgctcaaaacgtcgtatgcgtgggcggaaagacggcacaagggaaaggat
ccggtgaaatacgcccgcagtaagtgggaaagcaacaactttcaccagggcgaagactgc
gaacccgcgcatgcaagggtgtggggattcaaggcgccattcgaggttctgctcggtccc
gtcgcgccgggcctcgaaatgccgggggaggacacccggctcggcgcgctggccgcccgg
ctgtggctgccggcgctgattgccgaagggaagccccgctga
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integrated database retrieval system
