Candidatus Mycobacterium methanotrophicum: M5I08_02930
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Entry
M5I08_02930 CDS
T08748
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mmeh
Candidatus Mycobacterium methanotrophicum
Pathway
mmeh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmeh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M5I08_02930 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmeh03400
]
M5I08_02930 (recD)
Enzymes [BR:
mmeh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
M5I08_02930 (recD)
DNA repair and recombination proteins [BR:
mmeh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M5I08_02930 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
UvrD-helicase
AAA_11
NAT10_TcmA_helicase
AAA_22
PhoH
RecD_N
SH3_13
AAA_16
Herpes_Helicase
Mg_chelatase
nSTAND3
SRP54
AAA_28
TraI_hel_assoc_N
SLFN-g3_helicase
NTPase_1
DO-GTPase1
Flavi_DEAD
MukB
ABC_tran
CbiA
TrwB_AAD_bind
AAA_29
ATPase
AAA_5
AAA
NACHT
UvrD_C
AAA_7
Motif
Other DBs
NCBI-ProteinID:
UQX11484
UniProt:
A0ABY4QNX2
LinkDB
All DBs
Position
545530..547239
Genome browser
AA seq
569 aa
AA seq
DB search
MTVTDVEPAVGVSGLLQAFNEAGVLDVSDVRVAERICFLAKETDERVALAVALLVRGLRS
GSVCIELASIASAVGVEDVPWPEPEGWLATVRASALLGEPPVLHLYDDRLLYLDRYWREE
KQVCDDLLALRVSGPIGDAPAFERLFPTGFEEQREAAEIALAQAVTVLTGGPGTGKTTTV
ARLLALLAEQAGTSRLRIALAAPTGKAAARLQEAVQHEVAKLDAADQDRLGELQAMTLHR
LLGSRPDSSSRFRHNRGNRLPHDVIVVDETSMVSLTLMARLLEAVRPDARLILVGDADQL
ASVEAGAVLADLVDGLSARSDVRVAALRTSHRFGEAIGLLAEAIRVGDADRALELLRSGD
EHIEFIEAGAPDGLRPILLPHALRLREAALLGAGNVALATLDEHRLLCAHREGRYGVRHW
NRQVEKWLSEATGQPPWSEWYPGRPLLVTTNDYGLRVYNGDTGVVMAGAEGLRAVIAGAG
GPLHFATSRLSDVETMHAMTIHKSQGSQADEVTVLMPSEDSRLLTRELFYTAMTRAKEKV
RVVGSEAAVRLAIERRAVRATGLRLSLRQ
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcacggatgtggagccagccgtcggcgtgagcggcttgctgcaggcgttcaac
gaggcgggcgtgctggacgtttcggatgtgcgggtggccgagcggatctgctttctcgcc
aaggagactgacgagcgggtggcgttggcagtggcgctcctggtgcgcgggctgcgcagc
ggatcggtgtgcatcgagctggcttcgattgcctctgcggtcggcgtcgaggacgtcccg
tggccggagccggaggggtggctggcgacggtgcgggccagtgcgttgctcggcgagccg
ccggtgctgcatctctacgacgatcggctgctctacctcgaccggtactggcgcgaggaa
aagcaggtgtgcgacgacctgctggcattgcgggtgtcgggaccgataggcgatgcgccc
gccttcgagcgacttttcccgaccggtttcgaagaacagcgcgaggctgccgagatcgca
ctggcgcaggcggttacggtgctgacgggaggcccgggcaccggaaagaccacgacggtt
gcgcggctgctggccctgctcgctgagcaggcggggacgtcgcgactgcggatcgcgctg
gccgcacccacgggcaaggcggcagcgcggctgcaggaagccgtgcagcatgaggtggcc
aagctggacgccgccgatcaggaccggctcggtgagctgcaggcgatgaccctgcatcgg
ctgctgggcagtcggccggactcgtcgtcacggtttcggcacaatcggggaaaccggttg
ccgcacgacgtgattgtggttgacgagacgtcgatggtgtcgctgactttgatggcgcgg
ctgctggaggcggtgcgacctgatgcccggctgattctggtcggcgatgccgaccagttg
gcgtcggtggaagccggtgccgtgctggccgacttggtcgacggcctgtcagcgcgcagc
gacgtgcgggtggcggcgctgcggacatcgcaccggttcggtgaggcaatcggtcttctg
gccgaggcgatccgggttggcgacgcggatcgggcgctggagttgttgcgctcgggcgac
gaacatatcgagttcattgaagccggtgcccctgatgggctgcgtccgatcttattgccg
catgcgttgcggctgcgggaggcggcattgctgggggccggcaatgtggcgctggcgacg
ttggatgagcatcggctgctatgcgcacatcgggaaggccggtacggggtgcggcactgg
aaccggcaggtcgagaaatggctgtccgaagccacgggccagccgccgtggtcggagtgg
tacccgggccgtccgctcctggtgacgaccaacgactacgggttgcgggtctacaacggc
gacaccggtgtggtgatggcgggagccgagggccttcgggcggtcatcgcgggcgccggc
gggccgctgcacttcgcgaccagccggctctccgacgtcgagaccatgcacgcgatgacg
atccacaaatcccaaggcagccaggccgacgaggtgacagtgctgatgccatcggaggat
tcgcggcttttgacccgggagttgttctataccgcgatgactcgggccaaggagaaggtt
cgggtggtcggatcggaggcagccgtgagactcgcgatcgaacggcgggcggtgcgggcg
acaggcctgcggcttagcttacggcagtga
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integrated database retrieval system
