Candidatus Mycobacterium methanotrophicum: M5I08_03550
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Entry
M5I08_03550 CDS
T08748
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
mmeh
Candidatus Mycobacterium methanotrophicum
Pathway
mmeh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmeh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M5I08_03550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmeh03400
]
M5I08_03550
Enzymes [BR:
mmeh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
M5I08_03550
DNA repair and recombination proteins [BR:
mmeh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
M5I08_03550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
UQX11573
LinkDB
All DBs
Position
648870..649622
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AA seq
250 aa
AA seq
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MLIGSHVHQDDPLAAAEADSADVVQFFLGNPQSWKKPKPRDDAETLKASTMPLYVHAPYL
INVASANNRVRIPSRKILQDTCDAAAEIGAAAVIVHGGHADDDGMEAGFQRWVKALDYLE
TDVEVYLENTAGGDHAMARYFDTIGRLWDHIGDKGIGFCLDTCHAWAAGEKLIDAVDRIK
ALTGRIDLVHCNDSRDAAGSGADRHANFGAGQIDPDLLVAVVRAAGAPVICETADEGRKD
DIAFLREQLS
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
gtgctcatcggttcacatgtccaccaagatgatcccctggccgccgcggaggcggacagc
gccgacgtggtgcagttcttcctcggcaatccgcagagctggaaaaagccgaagccgcgc
gacgacgccgagacgctgaaggcgtcgaccatgccgctgtacgtgcacgcgccgtatctg
atcaacgtcgcgtcggcgaacaaccgggtgcgcatcccgtcgcgcaagatcttgcaggac
acctgtgacgccgcggccgagatcggcgccgccgcggtgattgtgcacggcggtcacgcc
gacgacgacggcatggaggccggcttccagcgctgggtcaaggcgctggactacctcgaa
accgacgtcgaggtctacttggagaacacggccggcggcgatcacgcgatggcacgctac
ttcgacaccatcggacggctctgggatcacatcggcgacaagggaatcgggttctgtctg
gacacctgccatgcgtgggccgcgggtgagaagctgattgacgcggtcgatcggataaaa
gccttgaccggccgcatcgatctggtgcattgcaacgactctcgggacgcggcgggctca
ggtgcggaccggcacgccaacttcggcgccgggcagatcgaccccgacctgctggtggcg
gtggtccgggccgcgggcgcgccggtgatctgcgaaacggccgacgagggccgcaaggac
gacatcgccttccttcgtgagcagctgagctga
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