Candidatus Mycobacterium methanotrophicum: M5I08_05300
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Entry
M5I08_05300 CDS
T08748
Name
(GenBank) ribulose-bisphosphate carboxylase
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
mmeh
Candidatus Mycobacterium methanotrophicum
Pathway
mmeh00630
Glyoxylate and dicarboxylate metabolism
mmeh00710
Carbon fixation by Calvin cycle
mmeh01100
Metabolic pathways
mmeh01110
Biosynthesis of secondary metabolites
mmeh01120
Microbial metabolism in diverse environments
mmeh01200
Carbon metabolism
Module
mmeh_M00165
Reductive pentose phosphate cycle (Calvin cycle)
Brite
KEGG Orthology (KO) [BR:
mmeh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
M5I08_05300
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
M5I08_05300
Enzymes [BR:
mmeh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
M5I08_05300
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
DUF6840
Motif
Other DBs
NCBI-ProteinID:
UQX11834
LinkDB
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Position
complement(975154..976551)
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AA seq
465 aa
AA seq
DB search
MAYDQSHRYSNLKLEEGRLIAEGNHVLCTYRLQPKPGHGFLATAAHVAAESSTGTNVEVS
TTDDFTRGVDALVYAIDEQAFGEAGGLIKLAYPLELFDRNITDGRMMLSQFTSLIVGNNQ
GMADFISLRLMDVYVPPKALLLFDGPALNISQLWRVLGRSPVDGGFVVGTIIKPKLGLRP
KPFADAAYDFWLGGDFIKNDEPQGNQPFCPMREVVPLLADSMRRAQDKTGEAKLFSFNIT
ADDPREIIARGEYILQVFGNDANKVAFLVDGFVAGPSGVATVRRHFPNVFLHYHRAGHGA
ITSGVNPRGYTTFVHIKLSRLLGASGIHVGTMGYGKMEGGKDDRAIAYMIERDSADGPYY
HQEWHGMRATTPIISGGMNAVRTPGFFDNLGHGNLIMTAGGGCYGHVDGPAAGAKSLRQA
YECWKAKADPLAWAKEYREFARAFESFPHDADALYPNWRKQLKVA
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcttatgaccagtcacatcgctacagcaacctgaagctggaagagggcaggctcatt
gcggagggcaaccacgttctctgcacgtaccggctccagccaaagcccggccacggcttc
ctggcgacggcggcgcacgtggctgctgaatcctccaccggaaccaacgtggaggtgagc
acgaccgacgacttcacccgtggcgtggatgccttggtctacgccattgacgagcaggcg
ttcggcgaggccggcggcttgataaagctggcctatccgctggagctcttcgaccgcaac
attaccgatgggcggatgatgctctcgcagttcaccagcctgatcgttggcaataatcag
ggaatggcagatttcatcagcctgcgcctcatggatgtctacgtgcctcccaaggctttg
ctcctttttgatggcccggcgctcaacatcagccaactttggcgcgttctggggcgatct
cctgtggatggcggtttcgtggtgggcaccatcatcaagcccaagctgggcctgcgtccc
aagccttttgccgatgccgcttatgacttttggctgggcggggatttcattaagaatgac
gagccccagggcaaccagccattctgtccgatgcgggaagtcgttccgctcttggccgac
tcgatgcgtcgcgcccaggacaagacgggcgaagccaagctattctcgttcaacattacg
gctgatgatcccagggaaattatcgctcgcggcgaatacatcctccaggttttcggcaat
gatgcgaataaggtggcctttctcgtggacggttttgtcgccgggccaagcggtgtcgcc
acagtgcgccgccatttcccaaatgtcttccttcattaccatcgggccggccacggagcc
atcacatcgggggtcaatccccgcggttataccaccttcgtccacatcaagttgtcacgg
ctcctgggggcatccggaattcatgtggggactatgggctacggcaagatggaaggcggc
aaggatgaccgggccattgcctacatgatcgagcgggacagcgccgatggcccttattac
catcaggagtggcacggcatgagggcgacgacgccgatcatctccggtggaatgaatgcg
gttcggaccccgggcttctttgataatttggggcacgggaatctcatcatgacggcggga
ggcggatgttacgggcacgtcgatggcccagccgctggtgccaaatccttacgtcaggcc
tatgagtgctggaaggcaaaggccgacccgttggcgtgggcaaaagagtatcgggagttc
gcccgtgcttttgaaagctttccccacgacgccgacgccctctacccgaattggcgcaag
cagctcaaggtcgcttga
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