Candidatus Mycobacterium methanotrophicum: M5I08_05440
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Entry
M5I08_05440 CDS
T08748
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
mmeh
Candidatus Mycobacterium methanotrophicum
Brite
KEGG Orthology (KO) [BR:
mmeh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmeh03032
]
M5I08_05440
03036 Chromosome and associated proteins [BR:
mmeh03036
]
M5I08_05440
03400 DNA repair and recombination proteins [BR:
mmeh03400
]
M5I08_05440
DNA replication proteins [BR:
mmeh03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
M5I08_05440
Chromosome and associated proteins [BR:
mmeh03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
M5I08_05440
DNA repair and recombination proteins [BR:
mmeh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
M5I08_05440
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Extensin_1
HC2
Motif
Other DBs
NCBI-ProteinID:
UQX11854
UniProt:
A0ABY4QML4
LinkDB
All DBs
Position
1003254..1003847
Genome browser
AA seq
197 aa
AA seq
DB search
MNKAELIDVLTEKLGSDRRSATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVVAGGARKSPAKKAT
KSTAKKAAKKAPARKVAAKKAPAKKAATKRAPAKKATKSTARKATKSTARTATKAPARQT
AAKKSPAKKATARRGRR
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcagagctcattgatgtgctcacagagaaattgggctcagatcgtcggtcg
gcaaccgccgccgtcgagaacgtcgtcgacactattgtgcgggcggtgcacaagggcgac
agcgtgaccatcaccggcttcggtgtcttcgaacagcgccgtcgcgcggcacgggtagcc
cgtaacccgcgcaccggtgagacggtaaaggtaaagccaacgtctgtgcctgcgttccgg
ccgggcgcacaattcaaagcggttgtctctggcgcacagcgcctcccagcggaaggacca
gcggtgaagcgaggcgtcgtcgctggcggtgccaggaagtcgccggccaagaaagcgacc
aagtcaactgccaagaaggctgcgaagaaggctccggcccggaaagtcgctgccaagaag
gcgcctgccaagaaggcggcaaccaagcgcgcgcctgctaagaaggccaccaaatcgacg
gcaaggaaagccactaagtcgacggcgaggacggcaacgaaggctccagctcgccagact
gcagccaagaagtcgcccgccaagaaggcaactgcccgtcgcggccgtcggtag
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integrated database retrieval system
