Candidatus Mycobacterium methanotrophicum: M5I08_05465
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Entry
M5I08_05465 CDS
T08748
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
mmeh
Candidatus Mycobacterium methanotrophicum
Pathway
mmeh00470
D-Amino acid metabolism
mmeh00550
Peptidoglycan biosynthesis
mmeh01100
Metabolic pathways
mmeh01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
mmeh00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
M5I08_05465
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
M5I08_05465
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
M5I08_05465
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mmeh01011
]
M5I08_05465
Enzymes [BR:
mmeh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
M5I08_05465
Peptidoglycan biosynthesis and degradation proteins [BR:
mmeh01011
]
Precursor biosynthesis
Amino acid ligase
M5I08_05465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_3
RimK
CPSase_L_D2
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
UQX12922
UniProt:
A0ABY4QRK0
LinkDB
All DBs
Position
1009177..1010298
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AA seq
373 aa
AA seq
DB search
MPAKTTDHGRVRVGVVFGGRSSEHAISCVSAGSILRNLDPERFDVLAVGITPDGSWVLTD
GDPDALAIVNRQLPGVSSDSGTELALAANPLRAGELVSLSPGGAEVLASVDVVFPVLHGP
YGEDGTIQGLLELAGVPYVGAGVLASAAGMDKEFTKKLALAEGLPIGAHAVLRALQSTLD
DPQRESLGLPVFVKPARGGSSIGVSRVTSWEQLPAAIARARQHDPKVIVEAAVVGRELEC
GVLEFPDGTVQASTVGEIRVAGVRGREDSFYDFATKYLDDDAELDVPAKIDDEVSDAVRD
LAIRAFKAIDCQGLARVDFFLTDDGPMINEVNTMPGFTTISMYPRMWAASGVDYSTLVAT
MVETALARGTGLR
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atccccgccaagacgaccgaccacggccgcgtccgcgtcggcgttgtattcggcggacgc
agcagcgagcacgccatttcctgtgtctcggcgggcagtattttgcgcaacctcgatccc
gagcggttcgacgtgctcgcggtcggcatcaccccggacgggtcgtgggtgctcaccgac
ggcgaccccgacgcgctggcgatcgtcaatcgtcagctgccgggggtgagctccgattcg
ggcacggagctggctctggccgctaatccgctgcgagccggtgagctggtatcgctgtcg
cctggcggggccgaagtgttggcgtccgtcgacgtcgtcttcccggtgttgcacggaccc
tacggggaagacggcaccatccaaggcctgctcgaactggccggcgtgccctacgtcggc
gcgggcgtgttggccagcgcggcggggatggacaaggagttcaccaagaagttggcactc
gccgaagggcttccgatcggcgcgcatgcggtgctgcgagcattgcagtcgacgctggac
gacccgcagcgcgaaagcctcgggctaccagtgtttgtcaagcccgcgcgcggcggctcg
tcgatcggcgtcagccgcgtgaccagctgggagcagctgcccgcggccattgcccgtgcg
cgccagcatgatccgaaggtgatcgtcgaggccgccgttgtcggccgtgagttggaatgc
ggcgtgctcgaattccctgacgggacagtgcaagcgagcactgtcggagaaatccgagtg
gccggggtccgcggccgagaggactccttttacgacttcgcaaccaaatacctcgacgac
gacgccgagctcgacgtccccgccaaaatcgacgacgaggtgagcgacgcggtgcgggac
ttggcgatccgggcgttcaaggcgatcgactgccagggcctggcccgagtggacttcttc
ctcaccgatgacggaccaatgatcaacgaggtcaacacgatgcccggcttcaccacgatc
tcgatgtacccgcggatgtgggcagcaagcggcgtggattattcgaccttggtggcgacc
atggtcgaaacggcgctcgcgcgggggacgggtctgcgctga
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