Candidatus Mycobacterium methanotrophicum: M5I08_05645
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Entry
M5I08_05645 CDS
T08748
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
mmeh
Candidatus Mycobacterium methanotrophicum
Pathway
mmeh02024
Quorum sensing
mmeh03060
Protein export
mmeh03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
mmeh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
M5I08_05645 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
M5I08_05645 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
M5I08_05645 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
mmeh02044
]
M5I08_05645 (ffh)
Enzymes [BR:
mmeh01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
M5I08_05645 (ffh)
Secretion system [BR:
mmeh02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
M5I08_05645 (ffh)
Eukaryotic Sec-SRP protein
M5I08_05645 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
nSTAND3
MeaB
cobW
ArsA_ATPase
AAA_30
TctA
APS_kinase
Zeta_toxin
AAA_16
AAA_22
AAA_31
AAA_24
NACHT
AAA_33
NPHP3_N
AAA_18
MobB
CLP1_P
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
UQX11884
UniProt:
A0ABY4QMQ0
LinkDB
All DBs
Position
1047380..1048951
Genome browser
AA seq
523 aa
AA seq
DB search
MFESLSDRLTGALQGLRGKGRLTDADIDATSREIRLALLEADVSLPVVREFVGRIKERAK
GAEVSGALNPAQQVVKIVNDELIGILGGQTRRLTFAKTPPTVVMLAGLQGSGKTTLAGKL
AVWLRSQGHTPLLVACDLQRPGAVNQLQIVGERAGVAVFAPHPGASADAAQEAGPGDPVA
VASAGLAEARAKHFDVVIVDTAGRLGIDEELMSQAAAIRNAIDPDEVLFVLDAMIGQDAV
ATAEAFREGVGFTGAVLTKLDGDARGGAALSVREVTGVPILFASAGEKLEDFDVFHPDRM
ASRILGMGDLLSLIEQAEQVFDAQQAEATAAKIGSGELTLEDFLEQMLAIRKMGPIGNLL
GMLPGAGQMKEALAAVDDKQLDRLQAIIRGMTPQERADPKIINASRRLRIANGSGATVSE
VNNLVDRFFEARKMMSSMVGSMGIPGLGRKSATRKSAKAKGGKGKKGKKRGPTAPRARGP
LGAGMPGMPAGFPDLSNMPQGLDELPPGLADFDLSKLNFPGNK
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgaatcgctgtccgaccggttgaccggcgccctgcaggggctgcgcggcaagggc
cggctcaccgacgccgacatcgacgccacctcgcgcgaaattcggctggcgctgctggaa
gccgacgtctcgttgccggtggtacgggagttcgtcggccggatcaaagaacgcgccaag
ggcgccgaggtgtccggtgccctcaacccggcgcagcaggtcgtcaagatcgtcaacgac
gagctcatcggcatcctgggcgggcagacccggcggctgacgttcgcgaagacgccgccg
accgtggtgatgctggccggtctgcaaggctccggaaagaccacgctggccggcaagctg
gcggtgtggctgcgcagccaagggcataccccgctgctggtggcttgcgacctgcagcgc
ccgggtgcggtcaaccagttgcagatcgtgggggagcgcgccggcgtcgcggtgttcgcg
ccacaccccggagcgtcggcggatgctgcgcaggaggcgggcccgggtgatccggtcgcc
gtcgcctcggccggactcgccgaggcccgggccaagcatttcgacgtcgtgatcgtcgac
accgccgggcggctgggcatcgacgaggagctgatgtcgcaggccgcggcgatccgcaat
gccatcgaccccgacgaggtgctgttcgtcctggacgcgatgatcggccaggacgcggtc
gcgaccgctgaagcgttccgcgagggcgtgggcttcaccggcgcagtgctgaccaagctg
gacggcgacgcacgcggcggcgccgcgttgtcggttcgcgaagtcaccggtgtgccaatc
cttttcgcgtcggccggcgagaagctggaggacttcgatgtcttccacccggaccggatg
gccagccgcatcttgggcatgggcgacctgctgagcctcatcgagcaggccgagcaggtc
ttcgatgcccagcaggcggaagcgacggccgccaagatcggctcgggtgagctgacgctg
gaggatttcctcgagcaaatgctggccatccgcaagatgggtccgatcggcaatctactg
gggatgcttcccggcgcgggtcagatgaaagaggccctggccgccgtcgacgacaaacaa
ctcgaccggctgcaggcgatcatccgggggatgacgccgcaggagcgcgccgatccgaag
atcatcaatgcctcgcgacggctgcgcatcgccaacggctccggtgcgaccgtgtcggag
gtcaataacctggtcgaccggttcttcgaggcccgcaagatgatgtcctcgatggtgggc
agcatgggcatacccgggttgggacggaagtcggcgactcgaaagagcgcgaaagccaag
ggcggcaagggcaagaagggcaagaagcgcggtccgacagcgccccgggcccgcgggccg
ctgggcgcgggcatgccagggatgccggccgggttccccgatctgtcgaacatgccgcag
ggtctcgacgagttgccgcccggcctggccgatttcgacctgtccaagctgaacttcccg
ggcaacaagtag
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