Candidatus Mycobacterium methanotrophicum: M5I08_07300
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Entry
M5I08_07300 CDS
T08748
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mmeh
Candidatus Mycobacterium methanotrophicum
Pathway
mmeh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmeh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M5I08_07300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmeh03400
]
M5I08_07300
Enzymes [BR:
mmeh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
M5I08_07300
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
M5I08_07300
DNA repair and recombination proteins [BR:
mmeh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
M5I08_07300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
zf-FPG_IleRS
Ribosomal_S13
Zn_ribbon_TFIIB
TMEM106_N
Rv2175c_wHTH
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
UQX12967
LinkDB
All DBs
Position
1332910..1333377
Genome browser
AA seq
155 aa
AA seq
DB search
MPGIAALGPDALQLSVDELAGLLAGNTGRIKSVVTDQKVIAGIGNAYSDEILHVAKISPF
ATAGKLADGQLAALHDAMVSVLTDAVSRCVGQQAATLKGEKRSGLRVHARTGLPCPVCAD
TVREVSFADKSFQYCPTCQTGGKVLADRRMSRLLK
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
gtgcccggcatcgccgcgctcgggccggatgcactgcagctctcggtcgacgagttggcc
gggctgctggcgggcaacaccggccggatcaagtccgtcgtcaccgaccagaaggtgatc
gccggcatcggcaacgcctacagcgacgagatcctgcacgtcgccaagatctcgccgttc
gccaccgcgggcaaactcgcggacggacagctggccgcattgcacgacgcgatggtgtcg
gtcctgaccgacgcggtgagccgctgcgtcggccagcaggccgcgacgctgaagggggag
aagcgctcgggtttgcgggtgcacgcgcgcaccggtttgccatgtccggtgtgcgcagac
accgtgcgggaagtctcgttcgccgacaagtcgtttcagtactgcccgacgtgtcagacc
ggcggcaaggtgctggccgaccggcgcatgtcgcgtctgctcaagtag
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integrated database retrieval system
