Candidatus Mycobacterium methanotrophicum: M5I08_07315
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Entry
M5I08_07315 CDS
T08748
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mmeh
Candidatus Mycobacterium methanotrophicum
Pathway
mmeh03420
Nucleotide excision repair
mmeh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mmeh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M5I08_07315 (pcrA)
03430 Mismatch repair
M5I08_07315 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmeh03400
]
M5I08_07315 (pcrA)
Enzymes [BR:
mmeh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M5I08_07315 (pcrA)
DNA repair and recombination proteins [BR:
mmeh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M5I08_07315 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
M5I08_07315 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
CarD_TRCF_RID
DEAD
Motif
Other DBs
NCBI-ProteinID:
UQX12968
LinkDB
All DBs
Position
1335802..1338174
Genome browser
AA seq
790 aa
AA seq
DB search
MLQRCDEEERRRLSVHVEAGADQLFDGLNPQQRQAVLHEGSPLLIVAGAGSGKTAVLTRR
IAYLLAARDVSPGQILAITFTNKAAAEMRERVAALIGARAALPMWVSTFHSACVRILRNQ
ASLIAGLNSNFSIYDADDSRRLLQMIAKDMGLDVKRYSPRLFANAISNLKNELIDPQQAM
ANLPDPDQADDLARTVAAVYSEYQHRLRAANALDFDDLIGETVAVLQSFPQIAQHYRRRF
RHILVDEYQDTNHAQYVLVRELVGHPARDTADDPDGVPQAELCVVGDADQSIYAFRGATI
RNIEDFERDYPNATTILLEQNYRSTQNILSAANSVISRNSGRREKRLWTDAGDGELVVGY
VADNEHDEARFVAEEIEALVAGGELTYNDVAIFYRTNNSSRPLEEVFIRAGIPYKVVGGV
RFYERREIRDIVAYLRVLDNPGDAVSMRRILNTPRRGIGDRAEACVAVYAENTGSSFADA
LEAAAEGKVPMLNTRSAKAIAGFVEMLEDLRGRLGGELGDLIEAVLDRTGYRAELESSSD
PQDLARLDNLNELVSAAHEFATDLQNAEALDETVGTPDDEDVPDTGVLAQFLERVSLVAD
ADEIPEHSAGVVALMTLHTAKGLEFPVVFATGWEDGMFPHMRALGDPKELSEERRLAYVG
ITRARQRLYVSRAKVRSSWGQPMLNPESRFLREIPQELIDWRRLDPAPSLRAPSSGPGRF
GSPRPSPARASASKRPLLVLEPGDRVTHDKYGLGRVEEVSGIGESAMSLIDFGSSGRVKL
MHNHAPVSKL
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagcgatgcgatgaggaggagcggcgcagattgagtgtgcacgtggaggccgga
gcagatcagttgttcgacggactcaacccccaacaacgccaggcagtactgcacgagggt
tcgccgctgctgatcgtcgccggcgcgggctcgggtaagacggccgtgctgacccggcgc
atcgcgtacctgttggctgcgcgcgacgtcagccctggccagattctggccatcaccttc
accaacaaggccgccgcggagatgcgggagcgggtggcggcgctgatcggagcacgcgct
gcgcttcctatgtgggtgtcgacatttcactccgcatgcgtgcggattctgcgcaaccag
gcttccctgattgccgggctcaactccaacttctccatttacgacgccgacgattcgcgc
cggctgctgcagatgatcgccaaggacatgggccttgacgtcaagcggtactcgccgcgg
ctgttcgccaatgccatctccaacctgaagaacgagctgatcgacccgcagcaggcgatg
gccaacctgcccgatcccgaccaggccgacgacttggcgcgcacagtggccgccgtttac
tccgaataccagcaccggctgcgggcggccaacgcactcgacttcgacgacctcatcggc
gagacggtcgcggtactgcagtccttcccacagattgcccagcactaccgtcggcgattc
cggcacatcctggtcgatgagtatcaggacaccaaccatgcccagtatgtgctggtccgc
gagctggtggggcatccggcgcgcgacaccgccgacgaccccgacggcgtcccgcaggca
gagctgtgcgttgtcggagacgccgaccagtcgatctatgcgttccgcggcgccacgatt
cgcaacatcgaagacttcgagcgcgactaccccaacgccacgacgatcctgctcgaacag
aattaccgatccacgcagaacatcctgtcggcggcaaactcggtgatctcgcgcaattca
ggacgccgggaaaagcggctgtggaccgacgccggcgacggcgagctggtcgtcggttat
gtcgccgacaacgagcacgacgaggcgcgattcgtcgctgaggagatcgaggcgctggtc
gccggtggtgagctcacctacaacgacgtggcgattttctaccgcaccaacaactcgtca
cggccgctggaagaggtgttcatccgcgctggtattccgtacaaagtcgttgggggcgtg
cggttttacgagcgcagggagattcgcgacatcgtcgcctaccttcgggtgctggacaat
cccggtgacgcggtcagcatgcggcgcattctcaacacgccgcggcgcggtatcggtgac
cgggccgaggcctgcgtggcggtgtacgccgagaacaccggttccagtttcgccgacgcg
ctcgaggccgccgccgaagggaaggtgcccatgcttaacacccggtccgccaaggcgatt
gccggtttcgtcgagatgctcgaagatctgcgtggtcgccttggcggcgagctcggggac
ctgatcgaggcggtgctggaccgcaccggataccgcgcagagctggagtcctcctccgac
ccgcaagacctcgcccggctggacaacctcaacgaactcgtcagcgccgcacatgaattc
gccacggaccttcagaacgctgaggcgctcgacgagactgtcggcacgcccgacgacgaa
gacgtcccggacaccggtgtgctggcgcaattcctggagcgggtctcgctggtcgccgac
gccgacgaaatccccgagcacagcgccggtgtggtcgcgctgatgacactgcacactgcg
aaggggctggaattcccggtggtgttcgcgaccggttgggaagacggcatgttcccgcac
atgcgggcattgggcgatcccaaggagctctccgaggagcgccggctagcctacgtcggg
atcacccgggcccgtcagcggctctatgtcagccgggccaaagtccgctcgtcgtgggga
cagccgatgctcaacccggagtcgcggtttttgcgggaaatcccccaggaactcatcgat
tggcggcgcctcgaccccgccccgtcgctgcgcgcgccgagcagcggccccggacgattc
ggctccccgcgcccatcgccggctcgtgcgtcggcaagcaaacgtccgctgctggtgctc
gaacccggtgaccgggtgacccacgacaagtacgggttgggccgtgtggaagaggtttcc
ggtattggcgaatcggcgatgtcgctgatcgacttcggcagctcggggagggtcaagctg
atgcataaccacgcccccgtcagcaagctttag
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integrated database retrieval system
