Candidatus Mycobacterium methanotrophicum: M5I08_07335
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Entry
M5I08_07335 CDS
T08748
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
mmeh
Candidatus Mycobacterium methanotrophicum
Pathway
mmeh00020
Citrate cycle (TCA cycle)
mmeh00640
Propanoate metabolism
mmeh00660
C5-Branched dibasic acid metabolism
mmeh00720
Other carbon fixation pathways
mmeh01100
Metabolic pathways
mmeh01110
Biosynthesis of secondary metabolites
mmeh01120
Microbial metabolism in diverse environments
mmeh01200
Carbon metabolism
Module
mmeh_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mmeh_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
mmeh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
M5I08_07335 (sucD)
00640 Propanoate metabolism
M5I08_07335 (sucD)
00660 C5-Branched dibasic acid metabolism
M5I08_07335 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
M5I08_07335 (sucD)
Enzymes [BR:
mmeh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
M5I08_07335 (sucD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
UQX12113
LinkDB
All DBs
Position
1341378..1342292
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AA seq
304 aa
AA seq
DB search
MSILLNKDNKVIVQGITGSEATVHTARMLKAGTQIVGGVNARKAGATVTHEDKGGRIIKL
PVFAHVSEAMEKTGADVSIVFVPPKFAKDAIMEAIDAEIPLLVVITEGIPVQDSAYVWAY
NLSKGGNTTPRTRIIGPNCPGIITPGEALAGITPANITGSGPVGLVSKSGTLTYQMMYEL
RDFGFSTSIGIGGDPVIGTTHIDAIEAFEKDPETKVIVMIGEIGGDAEERAADYIKANVS
KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKAALEAAGVKVGKTPSETAALARQI
LQSL
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcctcctgaacaaggacaacaaggtcatcgtccaaggcatcaccggcagcgag
gccaccgtgcacaccgcccgaatgctcaaagcgggcacccagatcgtcggcggggtgaac
gcgcgcaaggccggcgccaccgtcacccacgaggacaaaggcggccgaatcatcaagctg
ccggtgttcgcccacgtctccgaagcgatggaaaagaccggcgccgacgtgtcgatcgtc
ttcgtcccgccgaagttcgccaaggacgccattatggaggccatcgacgccgagattccg
ctgctggtggtcattaccgagggaatccccgtacaggacagtgcatatgtctgggcctac
aacctttctaagggcggcaacacgacccctagaacccgcatcatcggcccgaactgtccc
ggcatcatcacaccgggcgaggcgctggcgggcattaccccggccaacatcaccgggtcg
gggcccgtcgggctggtgtccaagtccggcacgctcacctaccaaatgatgtacgagcta
cgcgatttcgggttctccacgtcgatcggtattggcggcgacccggtgatcggcaccacc
cacatcgacgccatcgaggcgttcgagaaggacccggagaccaaggtcatcgtgatgatc
ggcgagatcggtggtgacgccgaggagcgtgcggccgactacatcaaggccaacgtgtcc
aagccggtcgtcggctatgtcgcgggattcaccgcgccggagggcaagacgatgggccac
gccggcgccatcgtgtccggatcatcggggaccgcggccgctaagaaagcggccctggaa
gcggccggagtcaaggtcggtaagactccctcggaaaccgctgcgctcgcccggcagatc
ctgcagagcctgtaa
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