Candidatus Mycobacterium methanotrophicum: M5I08_09785
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Entry
M5I08_09785 CDS
T08748
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
mmeh
Candidatus Mycobacterium methanotrophicum
Pathway
mmeh03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
mmeh00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
M5I08_09785 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
mmeh03011
]
M5I08_09785 (rpsA)
Ribosome [BR:
mmeh03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
M5I08_09785 (rpsA)
Bacteria
M5I08_09785 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
SOGA1-2-like_CC
Motif
Other DBs
NCBI-ProteinID:
UQX12486
UniProt:
A0ABY4QRH2
LinkDB
All DBs
Position
1816177..1817616
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AA seq
479 aa
AA seq
DB search
MPSPTATSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTVVKVDRDEVLLDIGYKTE
GVIPSRELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEELK
EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR
NNVVLSRRAWLEQTQSEVRSEFLNQLQKGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL
SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQVVPGK
VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAGGDDAMVKVIDIDLERRRISL
SLKQANEDYTEEFDPAKYGMADSYDEQGSYIFPEGFDPETNEWLEGFDAQRTEWEARYAE
AERRHKMHTAQMEKFAAADAAAAERPQANGPAGEEQQSGGSLASDAQLAALREKLAGSA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgccgagtcccaccgccacctcgccgcaagtagccgtcaacgacattggctcgagcgag
gattttctcgccgcgatcgataaaacaatcaagtacttcaacgatggcgacatcgtcgaa
gggacagtcgtcaaagtggaccgggacgaggtcctgctcgacatcggctacaagaccgaa
ggggtcatcccctcccgcgaactgtccatcaagcacgacgtcgatcccaacgaggtcgtt
tccgtgggtgatgaggtcgaggccctggttctcaccaaggaggataaagagggccggctg
atcctgtccaagaagcgcgcccagtacgagcgcgcctgggggaccatcgaagagctgaag
gagaaggacgaggccgtcaagggcaccgtcatcgaggtcgtcaagggcggcctgatcctc
gacatcgggctgcgcggcttcctgcccgcctcgctggtcgagatgcgccgggtccgcgat
ctgcagccctacatcggcaaggagatcgaagccaagatcatcgagctggacaagaaccgc
aacaacgtggtgctgtcccgccgggcctggctcgagcagacccagtcggaggtgcgcagc
gagttcctcaaccagctgcagaagggcgccatccgcaagggtgtggtgtcctcgatcgtc
aacttcggcgcgttcgtcgacctcggcggtgtcgacggtctggtgcatgtctccgagctg
agttggaagcacatcgaccacccgtccgaggtggttcaggtcggcgacgaggtcactgtc
gaggtgctcgacgtcgacatggatcgcgagcgggtttcgttgtcgctcaaggccactcag
gaagacccgtggcggcacttcgcccgcacccatgccatcggccaggtcgtgccgggcaag
gtcaccaagctcgttccgttcggcgcgttcgtgcgcgtcgaggagggcatcgaagggctg
gtgcacatctccgagctggccgagcggcacgtcgaggttcccgaccaggtggtcgccggc
ggcgacgacgcgatggtcaaggtcatcgacatcgacctggagcgccgccgcatctcgctg
agcctcaagcaggccaacgaggactacaccgaggagttcgacccggccaagtacggcatg
gccgacagctacgacgagcagggcagctacatcttcccggagggtttcgaccccgaaacc
aacgaatggctcgaaggtttcgacgcgcagcgcaccgaatgggaagcccgctacgccgag
gccgagcgccggcacaagatgcacacggcgcagatggagaagttcgctgcagccgatgct
gccgcggccgagcggccgcaggccaatggcccggcaggtgaggagcagcaaagtggcggc
tcgctggccagcgacgcgcaactcgccgcgctgcgggagaagctcgccggcagcgcctaa
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