Candidatus Mycobacterium methanotrophicum: M5I08_09800
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Entry
M5I08_09800 CDS
T08748
Symbol
ligD
Name
(GenBank) non-homologous end-joining DNA ligase
Organism
mmeh
Candidatus Mycobacterium methanotrophicum
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_C
DNA_ligase_A_M
RNA_ligase
UvrA_inter
Arm-DNA-bind_4
Motif
Other DBs
NCBI-ProteinID:
UQX12489
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Position
complement(1819344..1820342)
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AA seq
332 aa
AA seq
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MTDLAGLPDFLRAALRDEPVPDWRAPTLATLTEKRFSDPGWIFERKFDGMRALAFRDGDR
VRLLSRNCLSLNGTYPELVDALAAQSTSRFVLDGEVVAFVGRRTSFARLQGRLGITNPAV
ARKSPVRVYYYLFDLLHLDGASTIDISLTWRKRLLRSAIQFSGPLRNTPHRVEDGIAAYR
AACQRGDEGVIAKLADSKYDGRRSPNWLKFKCVRDQEFVVGGYTAPKGSRVELGALLLGY
YDGRDLVYAGKVGTGFDEATLRSLHNRLSAVEQDAPPFTRGLRHVAGARWVHPELVAQIG
FTEWTRDGKLRHPRYQGLRTDKEAAEVVRETR
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacctcgccggcctgcccgacttcctccgtgcggcgctgcgcgacgagccggtg
ccagactggcgagctcccaccctggccaccttgaccgaaaagcgattctccgatcccggc
tggatcttcgagcgcaagttcgatgggatgcgcgctctggcgtttcgcgacggtgaccga
gtgcggctattgtcgcgaaactgcctgtcgctcaacggaacttacccggaactggtcgat
gcgctcgccgcgcagagcacttcgcggttcgtgctggacggcgaggtggtggcattcgtt
gggcggcgcaccagcttcgcccggctgcagggccgcctgggcatcactaacccggcggtg
gcgcggaagtcaccggtgcgcgtctattactacctgttcgacctgctgcacctggatggc
gcgtccaccatcgacatttcgctgacctggcgcaaacgtttgctgcgcagcgctattcaa
ttcagcggtccgctccgcaacaccccgcaccgcgtcgaagacggcatagccgcctatcga
gccgcgtgccagcggggcgacgaaggggtgattgccaaactggccgactcgaagtatgac
ggccgccgctcgccgaactggctgaaattcaagtgcgtccgcgaccaggagttcgtcgtc
ggcggttacaccgctcccaaaggcagccgggtggagttgggtgcgctgctgctcggctac
tacgacggccgcgacctggtctacgccggcaaggtgggaacgggcttcgacgaagccacg
ctgcgcagcctgcacaaccgactgtcggcggtcgaacaagacgcgccgccgttcacccgc
gggctgcgccacgttgccggggcccggtgggtgcacccggagctggtcgcccagatcggc
ttcaccgagtggacccgcgacggcaagctgcgccacccccgctaccagggactgcgcacc
gacaaggaggctgccgaagtagtacgggagacccgctga
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