Candidatus Mycobacterium methanotrophicum: M5I08_10895
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Entry
M5I08_10895 CDS
T08748
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
mmeh
Candidatus Mycobacterium methanotrophicum
Pathway
mmeh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mmeh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
M5I08_10895 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmeh03019
]
M5I08_10895 (orn)
03009 Ribosome biogenesis [BR:
mmeh03009
]
M5I08_10895 (orn)
Messenger RNA biogenesis [BR:
mmeh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M5I08_10895 (orn)
Ribosome biogenesis [BR:
mmeh03009
]
Eukaryotic type
Pre-60S particles
RNases
M5I08_10895 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
UQX12654
UniProt:
A0ABY4QS97
LinkDB
All DBs
Position
complement(2044585..2045232)
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AA seq
215 aa
AA seq
DB search
MRDELVWIDCEMTGLDLRTDKLIEIAVLVTDADLNVLGDGIDVVIHADDAALSSMIDVVT
EMHTRSGLIEEVRASTVDVTTAETMVLDYVREHVKQAKTAPLAGNSIATDRGFIARDMPV
LDSYLHYRMIDVSSIKELCRRWYPRIYYGQPAKGLAHRALADIHESIRELQYYRRTAFVP
PPGPATSDIAAIAVELGGEPAALEEIDSVVERPNG
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggacgaactggtgtggatcgactgcgagatgaccgggctggatctgcgcacggac
aagctgatcgagatcgccgtgctggtcaccgatgcggacttgaatgttctcggtgacggc
atcgacgtggtgatccacgccgacgatgcggcgttgtcatcgatgatcgacgtggttacc
gaaatgcacacccgatccggcctcatcgaggaggtgcgggcgtccactgtggatgtgacg
accgcggagacgatggtgctcgactacgtccgcgagcacgtcaaacaagccaaaacggca
ccgctggccggtaactcgatcgccaccgaccgcggattcatcgcccgcgacatgcctgtg
ctggactcgtatctgcattaccggatgatcgatgtgagctcgatcaaggaactgtgccgg
cgctggtacccccgcatctactacggccagccggccaagggcttggcgcatcgcgcgctg
gccgacattcacgaatccatccgcgaattgcagtactaccggcgcaccgcgttcgtgccg
ccgccagggcctgccaccagcgacattgccgcgatagctgtcgagctggggggcgaaccg
gccgcgctggaggaaatcgattcggttgtcgagcgccctaacggctag
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