Candidatus Mycobacterium methanotrophicum: M5I08_12235
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Entry
M5I08_12235 CDS
T08748
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
mmeh
Candidatus Mycobacterium methanotrophicum
Pathway
mmeh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmeh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M5I08_12235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmeh03400
]
M5I08_12235
Enzymes [BR:
mmeh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M5I08_12235
DNA repair and recombination proteins [BR:
mmeh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M5I08_12235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
UQX13068
UniProt:
A0ABY4QT92
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All DBs
Position
2324102..2326048
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AA seq
648 aa
AA seq
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MLSVPHLDREFDYLVAADQSDDAQPGVRVRIRFHGRLVDGFVLERLTDTDHVGQLAWLDR
VVSAETVLTPEIRRLVDAVTARYAGTRADVLRLAVPPRHAKVERENPTPPAIPVVAVVDR
TAWETYSRGGQFLTALSESRAARAVWQALPGEQWAGRFAEAAALTVQSGRAALVIVPDQR
DVDAMWRAATTLLDESIVVALSAGLGPAARYRRWLAALRGSARLVIGTRSAVFAPVNDLG
LVMVWDDGDDTLVEPRAPYPHAREVAMLRAHQLRCAAVIGGYARTAEAHALVRSGWAHDV
VAARPVVRVRSPRVVALEDGGYAEARDPAARTARLPSVALRAARSALEAGAPVLVQVPRR
GYVPSLACGRCRAIARCRHCTGPLSLDGRNETGPVCRWCGRSDAALRCARCGSDAVRAVV
VGARRTAEELGRAFPGVAVITSAGEAVVSEVASHPALVVATPGAEPRATGGYGAALLLDS
WALLGRQDLRAAEDTLRRWMAAAALVRSRNDGGVVTVIAESSVPTVQSLIRWDPVGHAEA
ELAARTEVALPPSVHMAALDGAADAVAALLDEIGLPDSAELLGPVELPAGARRPPGTPAD
VAVIRMLVRVRREQGLALAAELRRGVAVTSARQTDEPVRVQIDPLHIG
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcggtaccgcacctggaccgcgagttcgactatctggtggccgccgatcaatcc
gacgacgcccagcccggggtgcgggtgcggatccgattccacggccgattggtcgacggg
tttgtcctggaacgcctcaccgacaccgatcacgtcggccagctggcctggctggaccgg
gtggtgtccgccgagacggtgctcactccggagatccgtcggttggtcgacgccgtcacg
gcccgctacgcgggaacccgtgccgacgtgctacggctggcagtaccgccgagacatgcc
aaagtggaacgcgaaaacccgacgccgccagcgattcccgtcgtcgccgtcgtcgaccgg
acggcttgggagacatatagccgcggcggacagttcctgaccgcgctgagcgagtcgcgc
gccgcccgcgcggtatggcaggcgttgcccggtgagcagtgggcgggccgattcgccgag
gccgccgcgttgacggtgcaaagcgggcgtgcggcgctggtgatcgtgcccgatcagcgc
gacgtggacgcgatgtggcgcgcggcgaccacgctgctcgatgaatccatcgtggtggcg
ttgtcggcggggttgggtcccgccgcgcgctaccggcgctggctggcggcgctgcggggc
agcgcgcggctggtgatcggcacgcgcagtgcggtgttcgcgccggtgaacgacctcggg
ctggtcatggtgtgggacgacggcgacgacaccctggtcgagcctcgggcgccctatccg
cacgcccgcgaggtcgcgatgctgcgcgctcatcagctgcggtgcgccgcggtcatcggc
ggctacgcccgcaccgcggaagctcatgcgctggtgcgcagtggatgggcgcatgacgtg
gtcgctgcgcgcccggtggtgcgcgttcgcagcccgcgggtggtcgcactcgaggacggt
ggctacgcggaggcgcgggatccggccgcccgcaccgcgcggctgccgtcggttgcgctg
cgcgccgctcgctcggcgctggaggcgggggcgccggtgctggtgcaggtgccgcggcgc
ggctacgttccgtcgctggcctgcgggcgttgccgggcgatcgctcgctgtcggcattgc
acgggcccgctgtcactggacggccgcaacgagacaggtccggtgtgccgatggtgcggt
cgttcagacgccgcgctgcggtgtgcgcgatgcgggtcggatgcggtgcgcgctgtcgtg
gtcggggcgcggcgcaccgccgaggagctcggccgggcgttcccgggtgtcgcggtgatc
acctcggcgggcgaagcggtggtgtccgaggtcgccagtcacccggcgctggtggtggcc
acgcccggtgcggagccgcgcgcgacgggcggatacggggcggcgctgctgctggatagt
tgggcgctgctgggccgtcaggatctacgcgcggccgaggacacgttgcggcgctggatg
gccgcggcggcgttggtccgatctcgcaatgacgggggggtggtgacggtgatcgccgaa
tcatcggttcccacagtgcaatcgctgatccgctgggatccggtcggccacgcagaggcg
gagctggcggcccgcaccgaggtcgccctgccgccgagtgtgcacatggccgctctcgac
ggcgccgccgatgcggtcgcggcgctgctcgacgaaatcggcttgcccgatagcgccgag
ctgctcggcccggtggagctgccggcgggcgcgcgccgaccgccggggactccggccgac
gttgcggtgatccggatgctggtgcgggtccgtcgtgagcagggcctggcgctggcggcc
gagctgcggcgcggcgtcgccgtcaccagtgcccggcaaaccgacgagccggtccgggtg
cagatcgacccgctacacatcggctag
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