Candidatus Mycobacterium methanotrophicum: M5I08_12710
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Entry
M5I08_12710 CDS
T08748
Symbol
ripA
Name
(GenBank) NlpC/P60 family peptidoglycan endopeptidase RipA
KO
K21473
peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
Organism
mmeh
Candidatus Mycobacterium methanotrophicum
Brite
KEGG Orthology (KO) [BR:
mmeh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mmeh01002
]
M5I08_12710 (ripA)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mmeh01011
]
M5I08_12710 (ripA)
Peptidases and inhibitors [BR:
mmeh01002
]
Cysteine peptidases
Family C40
M5I08_12710 (ripA)
Peptidoglycan biosynthesis and degradation proteins [BR:
mmeh01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
M5I08_12710 (ripA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLPC_P60
CCDC93_CC
CHAP
Motif
Other DBs
NCBI-ProteinID:
UQX09312
LinkDB
All DBs
Position
2418835..2420286
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AA seq
483 aa
AA seq
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MRRNRRGSSFRLAARLTRRVAPIALSLAVTLCTPGLANADPSAEPNTMAKLIADVASANQ
RLHDLSAQIQTEEESVNKAVVDVETARDNAAATQHNVEASQQAVKDANAAIAAAQKRFDR
FAVASYVNGPSDSYFKAAGPDDIVATAAAGQTLAASSGRAMNNLRRARTEQVNRESAARL
AKQKADKAVADAQSSQNAAVAALTDVHRKFGEQQQEVNRLADERNAAQARLDAARNWSKS
AGGPGARGQAAPTLGSPGDRWDPAAPGSPNRSQSNGGNWDGEWDPTLPMVPSANVPGDPV
AVLNKVLGISATSSQVTADMGHKFLQQLGLIKPDTPDSGITNGRIPRVYGRQASEYVIRR
GLSQLGVPYSWGGGNAAGPSHGIGSGSGTVGFDCSGLVLYSFAGVGIKLPHYSGSQYNLG
RKVPSSQMRRGDVIFYGPGGSQHVTIYLGQGQMLEAPDVGLKVRVAPVRTSGMTPYVVRY
IEY
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagacgcaaccgtcgtggctcgtctttccgactggccgccaggcttacccgccgcgtc
gctccgatcgcgctcagcctggctgtgacgctgtgcacccccggactcgcaaacgccgac
cccagcgcggagccgaacaccatggccaaactgatcgcagacgtcgcttcggccaaccag
cgtctgcacgacctcagcgcgcaaattcagaccgaagaggagagcgtcaacaaggctgtc
gtcgacgtcgaaaccgcgcgtgacaacgccgcggcaacccaacacaacgtcgaggccagc
cagcaggcggtcaaggacgccaacgccgcaatcgccgccgcacagaagcgatttgaccgc
ttcgcggtagccagctacgtgaacggtccatcggacagctacttcaaggcggccggcccc
gacgacatcgtcgcgaccgcggccgccggccagactctggcggccagttccgggcgggcg
atgaacaacctgcgacgggctcgcaccgagcaagtgaaccgggagtccgcggcgcggctg
gccaagcagaaagcggacaaagcggtggcggacgctcaatcgagccagaacgccgcggtg
gccgcactgaccgacgtacaccgcaagttcggcgaacagcagcaagaagtcaaccgattg
gccgacgagcgtaacgcggcccaagccagactcgacgccgcccgcaattggtcgaaatcc
gcgggcggaccgggtgcgaggggccaggcggccccgacattggggtcccccggtgaccgg
tgggatccggcggcgccgggttcgcccaaccggtctcagagcaatggcggcaattgggac
ggcgaatgggatcccacgctgccgatggtgcccagcgccaacgtcccgggtgacccggtc
gcggtcctcaacaaagtcctggggatttcggcgacctcttcgcaggtcaccgccgacatg
gggcacaagttcctgcagcagttaggcctgatcaagcccgacacccccgattccggcatc
accaacggccggattccccgggtatatggtcgccaggcgtctgagtacgtgatccgccgc
gggctctcgcagttgggcgtgccctattcgtggggcggtggcaacgcagccgggccgagt
cacggcatcggatccggctccggcacagtgggtttcgactgctcgggtctggtgctctac
tcgtttgccggggtggggatcaagctgccgcactactcgggttcgcagtacaacctgggc
cgcaaggtcccgtcttcccagatgcgccgtggcgacgtgattttctatggtcccggcggc
agtcagcacgtcaccatttacctcggtcaggggcagatgctcgaggcgcccgacgtgggg
ttgaaagtccgggtcgcaccggtccgtaccagcggtatgacgccctatgtcgtgcgctac
atcgagtactga
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