Candidatus Mycobacterium methanotrophicum: M5I08_13730
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Entry
M5I08_13730 CDS
T08748
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
mmeh
Candidatus Mycobacterium methanotrophicum
Pathway
mmeh00470
D-Amino acid metabolism
mmeh00550
Peptidoglycan biosynthesis
mmeh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mmeh00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
M5I08_13730 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
M5I08_13730 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mmeh01011
]
M5I08_13730 (murD)
Enzymes [BR:
mmeh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
M5I08_13730 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
mmeh01011
]
Precursor biosynthesis
Amino acid ligase
M5I08_13730 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
XdhC_C
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
UQX09467
LinkDB
All DBs
Position
complement(2629349..2630830)
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AA seq
493 aa
AA seq
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MSRADLQPGMAVLVAGGGVTGRAVLAALTALGVTATLCDDDPATRRRFADAGTATVDSST
AAQRIGDYALVVTSPGFPPTALAPAAAEAAGVPVWGDVELAWRLDASGHYGPPRRWLAVT
GTNGKTTTSSMLQAMLVAAGLRSTLCGNIGSPVLDVLDQPADFLAVELSSFQLHWAPSVR
PEAGVVLNIAEDHLDWHSTLADYIADKARVLTGRVAVAGLDDPRAAAMLSTTSAPVRVGF
RLGEPAVGELGVRDGMLVDRAFSEAGFSAGSDGLALAAVSSIPVPGPIGVLDGLAAAALA
RSVGVPAAAVADALATFRVGRHRAEVVAVVDQISYVDDSKATNPHAAEASVLAYPRVVWI
AGGLLKGASVHQTVARIAPRLVAAVLIGRDRALVADALSRHAPDVPVVQVATGEDADMHA
TAESAVTYVAKVVSQSDETVGIRVMNAAVAAARDLARPGDTVLLAPAGASFDQFTGYADR
GDAFAAAVRACCG
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgccgacctccagcccggcatggcggtgctggtcgcaggcggcggtgtgacc
ggccgggcggtgctggcggcgctgactgcgctgggtgtgaccgcaacgctctgcgacgac
gacccggcgacccgccggcggttcgccgatgccgggactgcgacggtggattcgtcaacc
gctgcccagcggatcggcgactacgccctggtcgtgaccagtcccggctttccgccgacg
gcactggcgcccgccgccgccgaggccgccggcgtcccggtctggggcgacgtcgagttg
gcctggcggctcgacgcgtccggtcactatgggccgccgcgccgctggctcgccgtcacc
ggcaccaacgggaagacgaccacctcgtccatgctgcaggccatgctggtcgccgcgggc
ctgcgcagcacgctgtgcggcaacatcggtagcccggtgctcgacgtgctggaccagccc
gccgacttcctggcggtcgagctgtccagcttccagttgcactgggcgccgtcggtgcgg
cccgaggcgggcgtggtactcaacatcgccgaagaccatctcgactggcactcgactctt
gccgactacatcgccgacaaggcgcgggtgctgaccggccgggtggcggtagccgggctg
gacgacccgcgcgccgcggcgatgctgtcgacgacctccgcgccggtgcgtgtcggcttc
cggctcggcgaacccgcggtcggggaactcggggtacgcgacggcatgctcgtcgaccgg
gctttttctgaagccggcttctcagccggctccgacggcctggcgctggcggcggtgtcg
tcgatcccggtgccggggccgatcggtgtgctcgacgggctggccgccgccgccctggcg
cgcagcgtcggggtgcccgcggcggcggtcgcggacgcactggcgacgtttcgggtgggc
cggcaccgcgccgaggtggttgccgtcgtcgaccagatcagctacgtcgacgactcgaag
gccaccaatccgcacgccgccgaggcatcggtgctggcatacccgcgagtggtgtggata
gccggcggcctgctcaagggcgcatcggtgcaccagaccgtggccagaatcgctccgcgg
ctggtcgcagcggtgctgatcggccgcgaccgggcactggttgccgacgcgttatcacga
cacgcgccggatgtccccgtcgtacaggttgcgacaggcgaggatgctgatatgcatgcg
actgctgagtctgctgttacctatgtggcgaaagtggtttctcagtcggacgagacggtc
ggcattcgcgtgatgaacgctgccgtcgcagccgcgcgagatctggcccggccgggcgac
acggtgttgctggcaccggctggagcgtcatttgaccagttcaccggctatgccgatcgc
ggcgacgcgttcgctgccgccgtgcgcgcctgctgcgggtag
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