Candidatus Mycobacterium methanotrophicum: M5I08_13880
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Entry
M5I08_13880 CDS
T08748
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mmeh
Candidatus Mycobacterium methanotrophicum
Pathway
mmeh00061
Fatty acid biosynthesis
mmeh00071
Fatty acid degradation
mmeh01100
Metabolic pathways
mmeh01212
Fatty acid metabolism
mmeh02024
Quorum sensing
mmeh04146
Peroxisome
Module
mmeh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mmeh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
M5I08_13880
00071 Fatty acid degradation
M5I08_13880
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
M5I08_13880
09145 Cellular community - prokaryotes
02024 Quorum sensing
M5I08_13880
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mmeh01004
]
M5I08_13880
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmeh04147
]
M5I08_13880
Enzymes [BR:
mmeh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
M5I08_13880
Lipid biosynthesis proteins [BR:
mmeh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
M5I08_13880
Exosome [BR:
mmeh04147
]
Exosomal proteins
Exosomal proteins of breast milk
M5I08_13880
Exosomal proteins of breast cancer cells
M5I08_13880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
TPT
Phage_tail_tube_init
Motif
Other DBs
NCBI-ProteinID:
UQX09488
LinkDB
All DBs
Position
2659853..2661655
Genome browser
AA seq
600 aa
AA seq
DB search
MREFSVPAPFTVSEHDNAVGAVFEHERDDPDTVIFQRLIDGAWTDVTCAAAAVQIRSTAL
GLIAQGVQAGDRVVIFSATRYEWAILDLAILAVGAVTVPIYETSSAEQVRWVLSDSGAVV
AFAETDAHAKMVTELSGDLPELRRVLQIDGSGAKALKQLEQDGASVDPAELTARIDALGC
DNLATLIYTSGTTGRPKGCQLTHSNLVYETRGAKEVLPTLLRKGERLLVFLPLAHVLARA
LALCAFHNKVVVGFTSDIKNLVPMFGVFKPTLVVSVPRVFEKVYNTAAQNAANDGKGRIF
AIAAQTAVDWSEACDHGGPGLALRAKHALFDRLVYHKLRTALGGDCRASVSGGAPLGARL
GHFYRGVGLTVYEGYGLTETSAAITVNQVGALKVGTVGKLLPGNSLRVADDGELLVRGGV
VFRGYWHNEQATNEAMDDGWFKTGDLGAVDDEGFLTITGRKKEIIVTAGGKNVAPAVLED
QLRADPLISQAMVVGDARPFVGALITIDPEAFEGWKQRNGKPAGAPVSDLVTDPDLMAEV
DTAVKQANLAVSHAESIRKFRILPVDFTEDTGELTPTMKIKRKVVAEKFAHDIEAIYARA
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtgaattcagtgttcccgccccgttcacggtgagcgagcacgacaacgccgtcggc
gcagtgttcgagcacgagcgcgacgaccctgacaccgtaatatttcagcgcctcatcgat
ggggcctggaccgacgttacctgcgccgccgccgcagtccaaatccgctcgacagcactg
ggtttgatcgcacaaggcgtgcaagccggcgaccgggtggtcatcttttcggctacccgc
tacgagtgggcgatcctcgatctggcgatcctggcggtaggcgcggtcaccgtcccgatc
tacgaaacctcgtcggccgagcaggtgcgctgggtgctgtcggactccggggcggtggtg
gcgttcgccgaaaccgacgcccacgcgaagatggtcaccgagctcagcggcgacctgccc
gagctgcggcgcgtgctgcaaatcgacggctcaggcgccaaagccctcaagcaactcgag
caggacggcgcgtcggtcgacccggccgagctgaccgcccgcatcgacgcattgggctgc
gacaacctggcgacgctgatctacacctcgggcaccaccggccgtccgaagggctgccag
ctgacccattccaacctggtctacgaaacccggggcgccaaggaggttctccccacgctg
ctgcgcaagggcgagcgcctgctggtgttcctgccgctcgcgcacgtgttggcgcgcgca
ctcgccttgtgcgcctttcacaacaaggttgtcgtcggattcaccagtgacataaagaat
ctggttccgatgttcggggtgttcaagccgacgctcgtggtgtcggtaccgcgggtgttc
gagaaggtgtacaacactgccgcgcagaacgccgccaatgacgggaagggtcgcatcttc
gcgatcgccgcgcagaccgcagtcgactggagcgaggcctgcgatcacggcggcccgggt
ttagcgctgcgggccaagcatgcgctgttcgatcgactggtgtatcacaagctgcgcacg
gcgctgggcggtgactgccgtgcgtcggtctcgggcggtgcaccgctgggcgcgcggctg
ggccacttctaccgcggcgtcggtctcaccgtctacgagggctacgggctgaccgagacg
agcgcggcgatcaccgtcaaccaggttggcgccctgaaagttggcaccgtcggaaagtta
ttgccaggcaatagtttgcgtgttgccgacgacggcgagctgttggtgcgaggcggcgtg
gtgttccgcggctactggcacaacgagcaggccaccaacgaagcgatggacgacggctgg
ttcaagaccggtgatctaggcgcggtcgacgacgaggggttcctgacgatcaccggccgc
aagaaggaaatcatcgtcaccgctggaggcaaaaacgtcgcccccgccgtattggaggac
cagctacgggcggacccgctgatcagccaggcgatggtcgtcggagacgcgcgaccgttc
gtgggtgcgctgatcaccatcgaccctgaggcgttcgagggttggaagcagcgcaatggc
aagcccgccggagcgccggtcagcgatctggtcaccgaccccgacttgatggccgaggtg
gacacggccgtcaaacaagcgaatttggcggtgtcgcatgcggaatcgatccgcaaattc
cgcatcctgcccgtcgacttcaccgaggacaccggcgagctcaccccgacgatgaagatc
aagcgcaaggtggtggccgagaagttcgcccatgacatcgaggcgatctacgccagggcc
tga
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