Candidatus Mycobacterium methanotrophicum: M5I08_14480
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Entry
M5I08_14480 CDS
T08748
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mmeh
Candidatus Mycobacterium methanotrophicum
Pathway
mmeh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmeh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M5I08_14480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmeh03000
]
M5I08_14480
03400 DNA repair and recombination proteins [BR:
mmeh03400
]
M5I08_14480
Enzymes [BR:
mmeh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
M5I08_14480
Transcription factors [BR:
mmeh03000
]
Prokaryotic type
Helix-turn-helix
AraC family
M5I08_14480
DNA repair and recombination proteins [BR:
mmeh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
M5I08_14480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
HHH
DUF6233
HHH_5
Gp-FAR-1
Motif
Other DBs
NCBI-ProteinID:
UQX09572
LinkDB
All DBs
Position
2790071..2791558
Genome browser
AA seq
495 aa
AA seq
DB search
MDDDFDRYYRAVQSKDARFDGWFVTAVLTTGIYCRPSCPVRPPFARNVRFYPTAAAAQHA
GFRACKRCRPDASPGSPEWNVRGDLVARAMRLIADGTVDREGVFGLAARLGYTARQLERL
LQAEAGAGPLALARAQRTQTARILIETTDLPFADVAFAAGFSSIRQFNDTVRSVCDSTPT
KLRQRASARFGRDAASSGLVSLRLPVRTSFAYEGVFGHLAAGVVPGCEEVRHGAYRRTLR
LPSGNGTVSLTPAPDHVRCLLVLDDFRDLTTAVSRCRRLLDLDADPDAVIEVLRSDPALA
PVVAKAPGQRIPRTVDEAELAVRTVLGQQISTKAARTHASRLVMAYGQSIHDADGELTHT
FPSVEQLADIDPTHLAVPKARRRTLTSLICRLADRSVVLDAGCNWDAARHQLLAVPGIGP
WTAEIIAMRGLGDPDAFPASDLGLHLAAKQVGLPTAQRALNARSRPWRPWRSYATQHLWT
TLEHPVNDWPSKEIA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtggatgacgacttcgaccgctattaccgggccgtgcaatccaaggacgcccgatttgac
ggctggttcgtcaccgcggtgctgaccaccggaatatattgccgccccagctgtccggtc
cggccaccgttcgcccgcaacgtccgtttctatccaaccgcggcggccgctcaacatgcc
ggctttcgcgcgtgcaagcgctgccgcccagacgcatcgccgggttcgccggagtggaac
gtccgcggcgacctcgtcgcccgagccatgcggctgatcgccgacggtaccgtcgatcgc
gaaggtgtctttggtcttgccgcccgcctcggctacaccgcccgtcagcttgagcggctg
ttgcaggccgaggccggcgccggcccgctagctctggcccgtgcgcagcgcacgcagacc
gcgcggatactgatcgagacaacggatctgccttttgccgacgtcgcttttgccgcaggc
ttttccagcattcgccagttcaacgacaccgtacggtcggtgtgcgacagcacgccaacc
aagttgcgccaacgcgcttccgcccgcttcgggcgcgacgccgcgtcatcgggcctggtg
tcgctgcgcctgccggtacggacatcgttcgcctacgagggagttttcggtcatctggcc
gctggcgtggtacccggatgcgaggaggtgcgccacggcgcctatcgccgcaccttgcga
ctgccgtcgggaaacggcaccgtcagtctgacacccgcgcccgatcacgttcggtgcctc
ttggtgctcgacgacttccgcgacctgacgaccgccgtctcccgctgtcggcgcctgtta
gacctcgatgccgatccggacgcagtgatcgaggtattgcgatccgatccggcgctcgct
cctgtggtggccaaggcacccgggcaacgcataccccggaccgtcgacgaggccgaactg
gccgtgcggacggtgctgggtcagcagatatcgaccaaggccgcgcgaacccacgcaagc
aggctggtcatggcgtatggccagtcaatccacgacgccgacggcgaactgacacatacc
tttccgtcggtagagcagctcgccgacatcgatccgactcatctggcagtcccgaaggcc
cgacggcgcaccctgacctccctgatctgccgactggccgaccgcagcgtggtccttgac
gccggctgcaactgggatgcggcccgtcaccagttgctggcggtacccggcatcggaccg
tggaccgcggagatcatcgccatgcgcgggctgggtgaccccgacgcctttcccgccagc
gacctcggactgcacttggctgcaaaacaagtggggctgcctaccgcgcagcgggcgtta
aatgcacgaagccgcccatggcgcccgtggcgctcctatgccactcagcatctctggacc
acgctggagcatccggtaaacgactggccgtccaaggagatcgcatga
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