Candidatus Mycobacterium methanotrophicum: M5I08_17055
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Entry
M5I08_17055 CDS
T08748
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mmeh
Candidatus Mycobacterium methanotrophicum
Brite
KEGG Orthology (KO) [BR:
mmeh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmeh03032
]
M5I08_17055
03400 DNA repair and recombination proteins [BR:
mmeh03400
]
M5I08_17055
Enzymes [BR:
mmeh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
M5I08_17055
DNA replication proteins [BR:
mmeh03032
]
Prokaryotic type
DNA Topoisomerases
M5I08_17055
DNA repair and recombination proteins [BR:
mmeh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
M5I08_17055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UQX09939
LinkDB
All DBs
Position
3306451..3307473
Genome browser
AA seq
340 aa
AA seq
DB search
MRLRKSAVGGPGFRRIRRGRCFSYVDAQRGRVDDPECLARIEALAIPPAWKNVWICPYPD
CHIQAVGTDAAGRRQYVYHEQWQAERSEEKYDRALSLAKHLLDWRLHLLTDLRGRGLGRN
RVLALAQHLIDHGYFRAGGEEYARENGSYGLATLRREHVRLHRDSVEFDYPAKSGVHRTI
SLEDSLVIKAVGSLLRAETKIPRLLVYRTSDGWSEVRADELNARFRKLVGDEFSVKDLRT
WHGTVLAAEAFAMAREPTSKTARRREEAAVMRAVAEELGNTPAVARSSYADPRVVTAYEQ
GATIAPALRRTKRQRTPEARRETLERATAQMIKRVAGAQR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgcgtaaaagcgccgtcggcggaccaggttttcgtcgtattcggcggggtcgc
tgcttctcctacgtcgacgcgcagcgcggccgcgtcgacgacccggaatgcctggcgcgg
atcgaagcgctggcgatcccgccggcgtggaagaacgtgtggatctgcccataccccgac
tgccacatccaagcggtcggcacggacgccgccggacgccgccagtacgtctaccacgag
caatggcaggccgagcgttcggaggagaagtacgaccgggcactcagcttggccaagcat
ctgctggactggcgccttcaccttctcaccgacctgcgaggccgcgggctcggccgcaat
cgcgtgctggcactggctcagcatttgatcgatcatggctacttccgggccggcggtgag
gagtacgcccgggagaatggcagctacggactggccacgctgcgccgtgaacatgtccga
ctacaccgtgacagcgtggaattcgactatcccgcgaaaagcggagtgcaccggacgatt
tcgctggaagactccctggtgatcaaggcggtcggatcgctgttgcgtgcggagacgaag
attccgcggctactggtgtatcgcacctcagatggctggtccgaagtgcgtgccgacgaa
ctcaacgctcgctttcgaaagctcgtgggtgacgagttcagtgtcaaggatctgcggacc
tggcacggcacggtgctggccgcggaggcgttcgccatggcccgagaaccgacgtcaaaa
acggctcgccgccgcgaagaagcggccgtgatgcgcgcggtggccgaagaattgggtaac
acgcccgcggtggcgcggagctcctatgcggatccacgggtcgtgaccgcctatgaacaa
ggcgccaccatcgccccggcactacggagaaccaaacgccagcgaacgccagaggcaagg
cgcgaaacgctcgagcgggccaccgcgcagatgatcaaacgcgtcgccggagcgcagcga
tga
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