Candidatus Mycobacterium methanotrophicum: M5I08_17480
Help
Entry
M5I08_17480 CDS
T08748
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
mmeh
Candidatus Mycobacterium methanotrophicum
Pathway
mmeh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mmeh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
M5I08_17480 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mmeh01007
]
M5I08_17480 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmeh03016
]
M5I08_17480 (aspS)
03029 Mitochondrial biogenesis [BR:
mmeh03029
]
M5I08_17480 (aspS)
Enzymes [BR:
mmeh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
M5I08_17480 (aspS)
Amino acid related enzymes [BR:
mmeh01007
]
Aminoacyl-tRNA synthetase
Class II (A)
M5I08_17480 (aspS)
Transfer RNA biogenesis [BR:
mmeh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
M5I08_17480 (aspS)
Prokaryotic type
Other AARSs
M5I08_17480 (aspS)
Mitochondrial biogenesis [BR:
mmeh03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
M5I08_17480 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
UQX10001
LinkDB
All DBs
Position
complement(3390211..3391989)
Genome browser
AA seq
592 aa
AA seq
DB search
MLRSHASGSLRAADAGQKVTLAGWVARRRDHGGVIFIDLRDASGVSQAVFRSGDVLAHAH
RLRAEFCIAVEGVVEIRPEGNANPEVATGEVEVNATSLTVLGECAPLPFQLDEPAGEEIR
LRYRYLDLRRDGPGGAIRLRSKVNAAAREVLAANDFVEIETPTMTRSTPEGARDFLVPAR
LQPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDMEMSFVDA
DDVIAISEQIIKAVWALTGYDVPLPLPRISYAEAMRRFGTDRPDLRFGLELVECTEFFND
TTFRVFQAPYVGAVVMAGGASQPRRALDGWQEWAKQRGHKGLAYVLVGDDGTLGGPVAKN
LSDAERAGLAAHVGAQPGDCIFFSAGPAKASRALLGAARVEIAHRLNFIDPDAWAFTWVV
DFPLFEPADEAAAAGEVAVGAGAWTAVHHAFTSPKPESEATFDTDPGSALADAYDIVCNG
NEIGGGSIRIHRRDIQERVFAMMGIGAAEAQEKFGFLLDAFTFGAPPHGGIAFGWDRIAA
LLAGSDSIREVIAFPKSGGGVDPLTDAPAPITAQQRKESGIDVVPDSHRDRR
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
gtgctacgcagtcatgcctccggatcattgcgcgccgccgacgcgggccaaaaggtcacg
ctggccggatgggtcgcgcgccggcgcgaccacggcggagtgatcttcatcgacctgcgc
gacgcgtcgggcgtgtcgcaggcggtgtttcgctccggggacgtgttggctcatgcccac
cggctacgcgccgagttctgcatcgccgtcgaaggtgtggtcgagatccgcccggagggc
aacgccaaccccgaagtcgcgaccggcgaagtcgaagtcaacgcaacgtcgctgacggtg
ctgggggagtgcgcgccgctgccgtttcagctcgacgagcccgccggcgaggaaattcgg
ctgcgctatcgctacctcgacctgcgccgcgacggccctggcggggcaattcggttgcgt
tccaaggtgaatgcggccgcccgggaggtgttggccgccaatgacttcgtcgagatcgag
accccgacgatgacgcgctcgacgccggaaggcgcccgcgacttcttggtgcccgcgcga
ctgcagcccggctcgttctatgcgttgccgcaaagcccgcagctgttcaagcaactgctg
atggtggccggcatggagcgctactaccagatcgcccggtgctaccgcgacgaggacttc
cgggccgaccgccagccggaattcacccaactcgacatggagatgagcttcgtcgacgcc
gacgacgtgatcgcgatctccgagcagatcatcaaggcggtatgggcgttgaccggttac
gacgtaccgctgccattgccgcggatcagctatgcggaggcgatgcgacggttcggcacc
gacaggcccgacctgcgattcgggctcgagctggtcgaatgcacagagttcttcaacgac
accacatttcgggtattccaggcgccgtatgtgggtgcggtggtgatggccggcggggcg
tcgcagccgcggcgtgccctggatggctggcaggagtgggccaagcagcgcgggcacaag
ggtctggcgtacgtgcttgtcggcgacgacggcacgctgggcgggccggttgccaagaat
ctgtccgatgccgagcgcgcgggcttggcggcgcacgtgggcgcccagcccggtgactgc
atcttcttctcggcggggccggccaaggcgtcgcgcgcgctgctgggcgccgcccgcgtg
gagatcgcccaccggctcaacttcatcgacccggacgcctgggcgttcacctgggtggtg
gacttcccgctgttcgagccggccgacgaagccgccgccgcgggtgaggtcgcggtaggc
gcgggcgcgtggaccgcggtgcatcacgcattcacgtcgcccaagccggaatcggaggcc
accttcgacaccgacccgggcagcgcgctggcagacgcctacgacatcgtctgcaacggc
aacgagatcggtggcggctcaattcgtatccaccgccgcgacattcaagaacgggtgttc
gcgatgatgggtatcggcgcagcggaggcgcaggagaaattcggcttcttgctggacgct
ttcactttcggcgcgccgccgcacggtgggatcgccttcggttgggaccggatcgccgcg
ctgttagcgggcagcgactccatccgcgaagtcatcgcattcccgaagtccggcggtggc
gtcgacccgctgaccgacgcgccggcgccgatcaccgcccaacagcgcaaggagtcgggc
atcgacgtcgtgcccgactcgcaccgagatcgacgctag
DBGET
integrated database retrieval system
