Candidatus Mycobacterium methanotrophicum: M5I08_17680
Help
Entry
M5I08_17680 CDS
T08748
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
mmeh
Candidatus Mycobacterium methanotrophicum
Pathway
mmeh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmeh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M5I08_17680 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmeh03400
]
M5I08_17680 (ruvB)
Enzymes [BR:
mmeh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M5I08_17680 (ruvB)
DNA repair and recombination proteins [BR:
mmeh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M5I08_17680 (ruvB)
RecFOR pathway proteins
M5I08_17680 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
TIP49
AAA_16
AAA_5
Mg_chelatase
RNA_helicase
AAA_14
nSTAND3
AAA_3
IstB_IS21
Zeta_toxin
TsaE
AAA_18
NTPase_1
Resolvase
Rad17
DUF815
NACHT
Sigma54_activ_2
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
UQX10035
LinkDB
All DBs
Position
complement(3428937..3430004)
Genome browser
AA seq
355 aa
AA seq
DB search
MSRFEDFEDEADEDREVSAALTVGEGDIDASLRPRSLREFIGQARVREQLQLVIEGAKNR
GGTPDHILLSGPPGLGKTSLAMIIASELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLF
IDEIHRIARPAEEMLYLAMEDFRVDVIVGKGPGATSIPLEVAPFTLVGATTRSGALTGPL
RDRFGFTAHMDFYEPAELERVLARSAGILGIEVGAEAGAEIARRSRGTPRIANRLLRRVR
DYAEVRADGVITRDVAKAALEVYDVDELGLDRLDRGVLSALTQSFGGGPVGVSTLAVAVG
EEAATVEEVCEPFLVRAGMLARTPRGRVATAQAWTHLGMTPPPRAAGLGQPGLFE
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgattcgaagacttcgaagacgaagcggacgaggaccgcgaggtttctgccgcc
ctgaccgtcggcgaaggcgacatcgacgccagcctgcggccgcgctcgctgcgcgagttc
atcggccaagcacgcgtccgcgaacagctgcagctggtcatcgagggtgccaaaaaccgc
ggcggcacaccggatcacatcctgttgtccggcccgccggggctgggcaagacgtcgctg
gcgatgatcatcgccagcgagctcgggtcgtcgctgcgggtaacctcggggcctgcgctg
gaacgtgccggcgacctggcggcgatgctgtccaacctcgtcgagcacgacgtgttgttc
atcgacgagatccaccgcatcgcccggcccgccgaggagatgctgtatctggcgatggag
gactttcgggtcgacgtgatcgtcggcaaaggccctggggcaacgtcgattccgctggag
gtggcgccgttcacgctggtcggcgcgaccacccggtcgggggcgctgaccggcccgctg
cgggaccggttcgggttcaccgcgcacatggacttctacgagccggccgagctggagcgg
gtgctggcccgttcggcggggatcttgggcatcgaggtgggggcggaggccggcgcggag
atcgcgcggcgctcgcggggcacgccgcgcatcgccaaccggctgctgcgccgggtgcgc
gactacgccgaggtgcgcgccgacggggtgatcactcgcgacgtcgccaaggccgcgttg
gaggtctacgacgtcgacgaactcggcctggaccggctggaccgcggcgtgctgtcggcg
ctgacccaaagcttcggcggcggtccggtcggggtgtcgacgttggcggtggcggtgggg
gaggaggccgccactgtggaagaggtatgcgagccgtttctggtgcgcgccggcatgctt
gcccgcaccccgcgcggccgggtggccaccgcgcaggcctggacccacctgggcatgacg
ccgccgcccagggcggcgggtttgggtcagccgggcctcttcgagtag
DBGET
integrated database retrieval system
