Candidatus Mycobacterium methanotrophicum: M5I08_17915
Help
Entry
M5I08_17915 CDS
T08748
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
mmeh
Candidatus Mycobacterium methanotrophicum
Pathway
mmeh00750
Vitamin B6 metabolism
mmeh01100
Metabolic pathways
mmeh01240
Biosynthesis of cofactors
Module
mmeh_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
mmeh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
M5I08_17915 (pdxS)
Enzymes [BR:
mmeh01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
M5I08_17915 (pdxS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
TetR_C_27
NanE
NMO
IGPS
Glu_synthase
DHO_dh
FMN_dh
Motif
Other DBs
NCBI-ProteinID:
UQX13198
UniProt:
A0ABY4QQG5
LinkDB
All DBs
Position
complement(3465396..3466244)
Genome browser
AA seq
282 aa
AA seq
DB search
MAEMLKGGVIMDVVTPEQARLAEGAGAVAVMALERVPADIRVQGGVSRMSDPDMIEGIVS
AVTIPVMAKARIGHFVEAQILQSLGVDYIDESEVLTPADYTHHIDKWKFTVPFVCGATNL
GEALRRINEGAAMIRSKGEAGTGDVSNATTHMRAIGAEIRRLGSVSDSELYVAAKELAAP
YDLVVEVARAGKLPVTLFTAGGIATPADAAMMMQLGAEGVFVGSGIFKSGDPARRAAAIV
KATTFFDDPDVLARVSRGLGEPMVGINVEEIAAPHRLAERGW
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggccgagatgctcaagggcggcgtcatcatggacgtcgtcacgcccgagcaggcccgc
ctcgccgagggcgccggcgccgtcgcggtgatggcgttggagcgggtgcccgccgatatc
cgcgtgcagggcggcgtgtcgcggatgagcgacccggacatgatcgagggcatcgtctcc
gcggtcaccatcccggtgatggccaaggcccgcatcgggcatttcgtcgaggcgcagatt
ttgcagagcctcggcgtggactacatcgacgaatccgaagtgctgaccccggccgactac
acccaccacatcgacaagtggaagttcaccgtgccgttcgtctgcggcgccaccaatctc
ggtgaggcgctgcggcggatcaacgagggcgcggcgatgatccgctccaaaggtgaagcc
ggcaccggcgacgtgtccaacgccaccacccatatgcgtgcgatcggtgcagagatccgt
cggctgggatcggtgtccgacagcgaattgtacgtggcggcaaaggaactcgcggcgccg
tacgacctcgtcgtggaggtggcgcgggccggcaagctgccggtcacgctgttcaccgcc
ggcggcatcgcgacgccggccgacgccgcgatgatgatgcagctcggcgcggaaggggtt
ttcgtcgggtcgggcatcttcaaatccggtgatccggcccggcgcgccgccgcgatcgtc
aaggccaccaccttcttcgacgatcccgatgtgctggcccgggtgtcgcgggggctcggt
gagccgatggtcggcatcaacgtcgaggagatcgccgcgccgcatcgcctggccgaacgc
ggctggtaa
DBGET
integrated database retrieval system
